| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1562 |
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| Symbol | |
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| ID | 5774566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1430379 |
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| End bp | 1431731 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 641317215 |
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| Product | hypothetical protein |
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| Protein accession | YP_001582896 |
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| Protein GI | 161529070 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1571] Predicted DNA-binding protein containing a Zn-ribbon domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAT TAGTTACCAA AAACGTGGTA AAAAAAACTG TTCTAAACAT TGGCTTTGAT
GATACTGATT CTCCAAAAGG AATGTGTACT ACTTTTTTGG CTTACAAAGT AGTAGATTTA
CTCAAAAAAC AGAAAACTGA ATTTCTTGAT TTTCCAAGAT TAATTCGATT CAATCCAAAC
ATTCCATGGA AAACACGTGG AAATGGAGCA GTTTCTATCA AAATTAAGAC TAGTAATCCA
TCAAAAATAA AAAATCAAAT CAAAAATCTT GTTTCAAAAT ATTCTGATAC AAAAAATGGA
GCAAATCCTG GTTTAGTTTT TTTTGAAAGT GATTCAATTC CTAATGAATT TACAAAATTT
AGTAATTTAG CTTTATGGCA ATTAATTAAT CGAAATAACG CAAAAAAGTT TGCTAAAAAA
AACAATCTTG AATATTTCTA CAAAGGAAAT GGACAAGGAT TGGTTGGTGC AATTGGTGCA
ATAGGTTATG ATTTTAATGA TCATACACTA GAGCTATTGA GTTATCGTAA AAAACAAAAA
TTTGGAAAAG AAAGAAAAAT TTCAACAAAA AGCGTTAAGG AAATGCAAGA AAAAACCTAT
CCTGACACTT TCAATAGTTT TGATACAAAA AAAGGGCGAG TTTTAATCAC TCCTCACGGT
CCAGATCCTG TATTTTTTGG TGTCCGTGGT GAAAATGTAG ATGCACTAGT TTCTGCATCT
AAGATTCTAA AAAGTGAAGA AAAACTAGAT GGTTACATGA TCTTCAAATC TAATCAAGGA
ACTGGTGACC ATTTGAAGAA TGAACTTACT TTTGAAACAA TGAAACCATA TGCTTCTGGA
AAATTAACTG GAGTTGTTTC AAATTCCCCC AGAATTGCCA AAGGAGGACA TGTATTTTTT
AAAATCCTCT CAAATGGTAA TGAGTTTTGG TGCGCAGTTT ACAAACCAAC GGGCATGTCT
GTTATTGCTT CAAATTTGAT CAAAGGCGAT AAAATTTCTG TGGGTGGGGG AGTTAGAAAG
GCTTCAAAAA ATTTCCCTCG AATAATTAAT CTTGAATTTA TTCAAATTAT TTCTCTTAAA
AAACAAACCA AGACATCAAA TCCAATTTGT AAAAAATGTA CTAAAAAAAT GAAATCTAAA
GGCAAGGGAC AAGGATTTGA ATGCATTCGC TGTGGAAAAA AATCTTCAAG AAAAATAAAT
GAAATAGTTA CTAGAAACCT AGGCCCACAA CTGTATTTGC CAAAAATTTC TGCTCATAGA
CACCTTACAC GTCCTCAACA AAGACAAGGC ATTCAAAACA AATCAACTAA TTTCAAAAAT
TCTCTATCTT GGTTTTGTGT TTATCAAAAT TAA
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| Protein sequence | MSELVTKNVV KKTVLNIGFD DTDSPKGMCT TFLAYKVVDL LKKQKTEFLD FPRLIRFNPN
IPWKTRGNGA VSIKIKTSNP SKIKNQIKNL VSKYSDTKNG ANPGLVFFES DSIPNEFTKF
SNLALWQLIN RNNAKKFAKK NNLEYFYKGN GQGLVGAIGA IGYDFNDHTL ELLSYRKKQK
FGKERKISTK SVKEMQEKTY PDTFNSFDTK KGRVLITPHG PDPVFFGVRG ENVDALVSAS
KILKSEEKLD GYMIFKSNQG TGDHLKNELT FETMKPYASG KLTGVVSNSP RIAKGGHVFF
KILSNGNEFW CAVYKPTGMS VIASNLIKGD KISVGGGVRK ASKNFPRIIN LEFIQIISLK
KQTKTSNPIC KKCTKKMKSK GKGQGFECIR CGKKSSRKIN EIVTRNLGPQ LYLPKISAHR
HLTRPQQRQG IQNKSTNFKN SLSWFCVYQN
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