Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1534 |
Symbol | |
ID | 5774455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1397307 |
End bp | 1398503 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641317185 |
Product | translation-associated GTPase |
Protein accession | YP_001582868 |
Protein GI | 161529042 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0012] Predicted GTPase, probable translation factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00000432045 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAGATCAT TGCAAATTGG TCTTTTAGGT AAAGCAAATG TAGGAAAATC CACCTTTTTC TCAGCTGCCA CTGAAACTCC TGTTGCTTCC GGAAATTTTC CATTTACTAC AATTGAACCA AATGTTGGTG TTGCATATGT TAAAGCTGAT TGTGCTTGCA AACATTTCAA AATTGAACAT CAAACTGATC TTTGCGTCAA TGGAACTCGT TTTATTCCTG TGAAACTTAT TGATATTGCT GGATTAGTTC CAGGAGCTCA TGAAGGAAAA GGATTGGGAA ATCAGTTTCT TGATGATGCA AGACAAGCTG AAGTTTTGAT TCATGTTGTT GATATTGCTG GAACTACTGA TATTCAAGGA CAACCTGTTC CACCTGGAAC TCATAATCCA TTAGAAGACG TAGAGTTTGT TCAAGACGAA TTTGATTTGT GGTTTGCTGA TATTTTAAAA CGTGATTGGG ATAAAATCAC TAGAGAGATT CATCAAAAGA GAGCAAAACT TACAGATGGA ATTGCAAACC GATTTACAGG TTTAGGCATA AAAGATTTTC AAGTACAAGA TGTACTCCAA AAACTTGGTT TTATCTCAAG AGATCCCAAA GAATGGAGTG AAGATGATAT TGTTGAATTT GCACGTGAAC TGAGAAAAAA CACAAAACCA ATGATCATTG CTGCAAACAA AGCTGATTTG TGTCCTGATC TTGATATCAT AAAAAAAATT AACGATAATG TTATTCCTTG TAGTGCAGAA ACTGAATTAT TACTAAGAAA AGCATCAAAG GCCGGAATTG TAAATTATTC GTCTGGTGAT GAAGGATTTT CAATTGCAGA AGGTAAAGAG ATTGCTCCTC CACAACAAAA GGCACTTGAT TTGGTGAAAT CTGTATTTGA AAAAATCCCT TCTACTGGAA TTCAGAAAAT TCTTAATACT GCAGTTTTTG ATTCATTGAA TTTCATTGTA GTCTATCCTG TTGAAGATGA AACTAAACTT ACTAACAAAG ATGGTGTGAT TCTTCCAGAT ACAAAATTAT TGCCTCAAGA TTCTACTGCA AAAGATTTGG CTGGATTAAT TCATGCAGAT ATTGCTAAAG GATTTTTGCA TGCAATTGAC TGTAAAACAA AACAAAGAAT CAGCGGTGAT CAAAAACTAA AAAATGGCGA TGTGATCAAA ATCGTATCAA CTCTAAGTAG GGGATGA
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Protein sequence | MRSLQIGLLG KANVGKSTFF SAATETPVAS GNFPFTTIEP NVGVAYVKAD CACKHFKIEH QTDLCVNGTR FIPVKLIDIA GLVPGAHEGK GLGNQFLDDA RQAEVLIHVV DIAGTTDIQG QPVPPGTHNP LEDVEFVQDE FDLWFADILK RDWDKITREI HQKRAKLTDG IANRFTGLGI KDFQVQDVLQ KLGFISRDPK EWSEDDIVEF ARELRKNTKP MIIAANKADL CPDLDIIKKI NDNVIPCSAE TELLLRKASK AGIVNYSSGD EGFSIAEGKE IAPPQQKALD LVKSVFEKIP STGIQKILNT AVFDSLNFIV VYPVEDETKL TNKDGVILPD TKLLPQDSTA KDLAGLIHAD IAKGFLHAID CKTKQRISGD QKLKNGDVIK IVSTLSRG
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