| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1440 |
|---|
| Symbol | |
|---|
| ID | 5774634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 1310429 |
|---|
| End bp | 1311712 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641317086 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001582774 |
|---|
| Protein GI | 161528948 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATATTA CAAAAAAGAT TGTTGTTGGA GGAGCGATAA TTGTAATATT GGCCATAATC
ACCAGTGGAA TTTTTTCCAT TTTGGTATCT GAAGAAATTA GTAATATGAC CATTCATGAA
GCAGAACGAG CTAATGCAGC GTACATCAAA TCTATTGCAT CTCAGGAACT TACAATGAAC
GACTTTGAAG CAATTAATTT TGATGAAAGA AAAACAACAT TTGAGAATTA TTTCCAGAGT
GTAGAAAATG ACAATACACT CAGAATTAAG GTATGGTCAA AAGATGGCAC TATAGTATAC
TCTGATGACA GTTCAATTGT AGGTGAAAAT TTTGCAGATA ATATTCGATT CCAAAACTCA
ATCAACGGGC AACTAGTATC AGAAATCAAA GATCCAGTAG ATCCTGAAAA TATTGCTGAA
ACTGGATATG GACAATTAAT GGAAATTTAC GTCCCCATTT ACTTGAATCA ATCTGAACCT
GTAGGCGTAA TAGAACTTTA TTTCTCAATG GATTCAATTA ATCAAGCTAT CAACAAAGCA
AGTTCTCTAG TTTATACAAT TATACTAATT CTAATTGGAT TACTTTCACT TGCAATACTT
GTTTTTTCTA TAATTGTAGC AAAATCCTCT AAACAAAACA TTGAACAAGA AAAATTTGCT
GTACTTGGTG AGCTCACAGC AAGATTGTCA CATGATCTTA GAAATCCTCT TTCAATAATT
GCAGCTGGAG TTTCATTAAT TTCAAAACAA ACACAAGAAG AAAAAACTGC TCAAACTTGT
GAAAAAATCG ATCATTCAGT AAAGCGAATG ACCCATCAGA TTGATGATGT TATGACTTTT
GTTAAAAAAC GAGAAAAAAA TATCCGAAAA ACTACTTTGA ATGAACTATT GGATTCTTCA
CTTGAAGAAC TAATAATTCC TGAAAATATT TCCATTGAAA GACCCTCTGA AAATCCTTCT
ATTACTTGTG ATAAAGATCA AATTGTCTTA GTATTCAACA ACATCCTTCT TAATGCAATT
CAGAAATTAG GTTCTGGAGG AAAAATTACT ATTTTGTATA GCGAAAACAA CAATGACCAT
GACATCACTA TTCAGGATTC TGGAGAACCC ATACCCGAAA CAAATCTGAA AAAAATATTT
GATCCATTAT TTACCACAAA ACAACAAGGT ACAGGACTAG GTCTGTATAG TTGTAAAACA
ATAATTGAAT CCCATAATGG AAGTATTACT GCAAATAACA ATCCTACAAG AATTACAATT
TCTCTTCCAA AAGAAGACAA GTGA
|
|---|
| Protein sequence | MNITKKIVVG GAIIVILAII TSGIFSILVS EEISNMTIHE AERANAAYIK SIASQELTMN
DFEAINFDER KTTFENYFQS VENDNTLRIK VWSKDGTIVY SDDSSIVGEN FADNIRFQNS
INGQLVSEIK DPVDPENIAE TGYGQLMEIY VPIYLNQSEP VGVIELYFSM DSINQAINKA
SSLVYTIILI LIGLLSLAIL VFSIIVAKSS KQNIEQEKFA VLGELTARLS HDLRNPLSII
AAGVSLISKQ TQEEKTAQTC EKIDHSVKRM THQIDDVMTF VKKREKNIRK TTLNELLDSS
LEELIIPENI SIERPSENPS ITCDKDQIVL VFNNILLNAI QKLGSGGKIT ILYSENNNDH
DITIQDSGEP IPETNLKKIF DPLFTTKQQG TGLGLYSCKT IIESHNGSIT ANNNPTRITI
SLPKEDK
|
|---|
| |