| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1427 |
|---|
| Symbol | |
|---|
| ID | 5774511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 1301276 |
|---|
| End bp | 1301872 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641317073 |
|---|
| Product | Sua5/YciO/YrdC/YwlC family protein |
|---|
| Protein accession | YP_001582761 |
|---|
| Protein GI | 161528935 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0009] Putative translation factor (SUA5) |
|---|
| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAGGTAA ACTGTGACAA GGAAGGAATT GAAAAGGCAT CCAAAGTAAT TGAGGATGGA
GGAATAGTTA TTTTTCCAAC TGATACTGTA TACGGCATTG GATGCAACCC TTACAGCAAA
GAGTCTGCAA AAAAAGTCTA TGAGATAAAA TCAAGGGATT TTTCAAAACC ATTTCCAGTT
CTAGTTTACT CTAAAGAGAT AGCCAGTCAG ATTGCCGAAT TTGATGAAAT TTCAGAAAAA
CTTGTAGAGA AATTTTGGCC AGGTCAACTA ACAATTCTTT TGAAATTAAA GGATGAAAAA
TTAAAAGAGT CATTGAATCT ATCAGACAAG ATTGCACTGC GAGTTCCAAA CCACAAATGC
ACATTATCAT TATTGGAAAA ATGTCATTAT CTAATTGGAA CTAGTGCAAA TGTTTCAGGA
CAACCATCAT TTTTTGATCC ACAAGAATGC ATCAAAAGTG TAGAAAACTA TGACGTGTTT
GTTGATGGTG GAACAATTAC AAGTAAAGGA GAATCAACTA TTATTGCAAT AGAAGATGGC
AAAATCAAAA TTATTAGAGA AGGCTCTTTG AGCAAAGAGG AGATTTTGAA GGTATGA
|
|---|
| Protein sequence | MKVNCDKEGI EKASKVIEDG GIVIFPTDTV YGIGCNPYSK ESAKKVYEIK SRDFSKPFPV
LVYSKEIASQ IAEFDEISEK LVEKFWPGQL TILLKLKDEK LKESLNLSDK IALRVPNHKC
TLSLLEKCHY LIGTSANVSG QPSFFDPQEC IKSVENYDVF VDGGTITSKG ESTIIAIEDG
KIKIIREGSL SKEEILKV
|
|---|
| |