| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1349 |
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| Symbol | |
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| ID | 5774540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1234843 |
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| End bp | 1236567 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641316994 |
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| Product | sensor protein |
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| Protein accession | YP_001582683 |
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| Protein GI | 161528857 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0628361 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTCAT TTGTAAGCAT CAGTACAAAA TTAATTTTTT TAGTGCTTGC AATTAGCATA
ACATCCATTG CAGTAACTAC TGGGCTGGCA TACAATTTTG CAGATTCAAT TATCAAAGAA
AATTTCAAAG AATCACTCAA AGATGAATCT GAAACTAGAG GAAATACAAT AGCCTCAATC
ATTGAATCAA GAATTGACAA GTTGGGAAAC TTTGCACAAA ACGAATCCCT TGTTAGTTCA
TTTGATGTTT TAATTCCTGT GTTGGATGAT GTTTCCTTTA ACAGGGCTTT AGAAGAGCAA
ACCCCACTAC TGCACCATGA ATTTCACTCA TTCCAGTTAA ATGAGTTTGA AGCAGGTATT
CGTGATCTTC AAATTATTAA CATGCGAGGA AAGCCCATTT TTTCATTAAA CGAGCAGGTT
GACCCTCTGA AATATGTTAA AGGAAACTAC AAGGTATCAG AACCCACTGT AGAGTTTGTA
CAATCTTTAG ATAAATCGCG CATTATGAAA ATCTCATTAC CCGTTTATTC TGATTCTGGA
AAGCAAGAAG CAGTAATGAT TGCAACAATG GGAACTTCGA TTTTTGACGA CATTTTGATG
AATAGATTTG GCTTACATGA TACAGGAGAA GTGTACCTTG TTAATCATAA CAGAATGATG
ATTTCAGAAT CAATATTTCT GGAAAACACT CCTTTTAATC AAAAAGTAGA TACGTTTGCT
GTCTCAGAAT GCTTTGAGAA CGGAAACAAT GTAGAAGCAT CAGAGTATAC TGATTATAGG
AATGTGGATA TTTTTGGATA CTCTTATTGT AAACCTGATT TAGGATTTGT TTTGCTTACA
GAAGTGGATG AAGCAGGCAT ACTCAAACCA ATAACTGAAC TACAAACTAA CATAGTGATT
GTTGGAATTA GCCTCATAAT TGTTGCAAGT ATAGTCACAT TTGTTCTCTC AAAGAGAATC
TCAAAACCCA TCATCAAATT ACGTGATGCA TCAAAACAAC TATCTGCAGG CAACTTTGAG
GTCAGAACAA ATATTCAGAC AAATGATGAG ATTGAAGAAT TATCTACATC ATTTGATAAC
ATGGCAAAGA CTTTGCAAGA GACAATATCT GCAATTGGAA AACGAGAAAA TATTATCAAA
CAACAGCAAG ATATTCTCTT AAAGTTCTCT GAACAAAAAA GAGAAGGATA TGTGTGTCTT
GTTGACTTGG TAGGGTCACT CAAGTTGACA CAAAATCTTT CTGATGATAA GAAAAAACGC
TACACTGAAA TCTTTACAGA GTCTGTTCTT CCAATTATCA AAAAACACGA AGGAATACCA
ATCAAAATCA TAGATGATGC AATCTTGTTC TACTTCCCAA TCTCTGCTGA TAATCTGGAA
TCTCTATCAA ATACTTTGAA TTGTTGTCTA GAGATTACAA AGCTAGAGCA TGAACTCAAT
GAGAAAACAG CTTCTGAAAA CCTTCCTGGA CTAGCGTATA GAATCAGCTC TGCATTTGGG
TCAGTAAATG AATCTAAGAC CTCTGATTCA AAATTGGATG ATATTTTTGG AGAGCCTGTA
AATGCTGTCT TTAAGATTAA TCAGTACGCA CTGCCTAATA CTGTAGTAGT AGATCATTCT
ATCTATGAAA AGGCAAGTGA ATCTGGTTTT GAATTTACCA AAATTGCTAG AAGTATAATC
AAAGGTTTGG AATTTACTAT TTTTGTGGTA TCCTCCAAGT TCTAA
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| Protein sequence | MGSFVSISTK LIFLVLAISI TSIAVTTGLA YNFADSIIKE NFKESLKDES ETRGNTIASI
IESRIDKLGN FAQNESLVSS FDVLIPVLDD VSFNRALEEQ TPLLHHEFHS FQLNEFEAGI
RDLQIINMRG KPIFSLNEQV DPLKYVKGNY KVSEPTVEFV QSLDKSRIMK ISLPVYSDSG
KQEAVMIATM GTSIFDDILM NRFGLHDTGE VYLVNHNRMM ISESIFLENT PFNQKVDTFA
VSECFENGNN VEASEYTDYR NVDIFGYSYC KPDLGFVLLT EVDEAGILKP ITELQTNIVI
VGISLIIVAS IVTFVLSKRI SKPIIKLRDA SKQLSAGNFE VRTNIQTNDE IEELSTSFDN
MAKTLQETIS AIGKRENIIK QQQDILLKFS EQKREGYVCL VDLVGSLKLT QNLSDDKKKR
YTEIFTESVL PIIKKHEGIP IKIIDDAILF YFPISADNLE SLSNTLNCCL EITKLEHELN
EKTASENLPG LAYRISSAFG SVNESKTSDS KLDDIFGEPV NAVFKINQYA LPNTVVVDHS
IYEKASESGF EFTKIARSII KGLEFTIFVV SSKF
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