Gene Nmar_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1304 
Symbol 
ID5774643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1193703 
End bp1194149 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content35% 
IMG OID641316948 
Productsignal-transduction protein 
Protein accessionYP_001582638 
Protein GI161528812 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000185547 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAATTCA GTAAATCCTT TGAAATATTA CGTGACACAA CCTTTTACAT GAGTTCTGAC 
ACTGTTCATC AGAAAACTCT TGTCAAAGAA ATTATGAGCA ACTCTGTTAT CTCTGTAGAT
TCTTCTATTA CAGCAACTGA TGCTGCAAAA ATGATGGAAG ACACTGGCGT TGGTGCAATT
GCCGTATTAG AAAATGGCTC CCCTGTTGGA ATTGTAACTG ATAGAGATTT TGCAATAAAA
ATTACTGCTC ATTCATATCC TATTGATACT CCTATCCGAA GAATAATGTC TGCCCCTCTC
ATTTCTATTG ATCCTAATTC TGATCTATGG ACTGCTTCTG ATTTAATGAC AACAAGAAAT
GTTCGGAAAC TACCTGTAAT TGATGATGAT CGAATTATTG GTATACTCAC TTCCAGTGAT
CTGGTCAAAT ATTTTGCTAG TCTTTAA
 
Protein sequence
MKFSKSFEIL RDTTFYMSSD TVHQKTLVKE IMSNSVISVD SSITATDAAK MMEDTGVGAI 
AVLENGSPVG IVTDRDFAIK ITAHSYPIDT PIRRIMSAPL ISIDPNSDLW TASDLMTTRN
VRKLPVIDDD RIIGILTSSD LVKYFASL