Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1302 |
Symbol | |
ID | 5773660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1191966 |
End bp | 1193108 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641316946 |
Product | DNA primase |
Protein accession | YP_001582636 |
Protein GI | 161528810 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000182826 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTCAAT CAGGAATTGT CAAATATCAT GTTAAACTTT CCTATGAAGT TGATGGGCTC GTTGAAAGAG CAGATATAAT CGGAGCCATC TTCGGCCAAA CAGAAGGACT GTTAGGCCCT GAGATGAATC TGAATGAACT GCAACGAGTT TCTAAAGTAG GTCGCATAGA AGTCAGTGCT AGAACTACTG CAAATACCAC TGCTGGTGAT GCATTAATTC CAATGAGTAC TGATATTGAT ACTTGTGCAT TGATTGCAGC AGGAATTGAA AGCATTGACA AAGTTGGTCC ATTTGATTGT AAATTTACCT TAGAAGCAAT TGATGATGTA CGTGCTGCAA AGAAAGATGA CATTGTAAAA CGTGCAAAAG AAATCAAGCA AAAATGGGCA ACTAAAACTG TTAGTGAAGG AGAAAGTATG CTAAATGATG TCCACCAAGG TGATTCTAAA AAATTAACCA CTTATGGTCC ATCCAAACTT ACTTGCAGTT CTGGCCTAGC TGATTCTAAC TGGGTAATTC TAGTTGAAGG AAGAGCTGAT GTGATAAATC TTCTCAGAGC AGGATATGAT AATGCACTTG CAATTGAAGG CGCAAAAATT GATGAATCTA TCAAAGAATT ATGCAATTCA AAAGAAACTG TTGTTGCATT CTTAGATGGC GATAGAGCAG GTGGATTTAT TCTAAAAGAA CTAAAATCAG TTGTCCCAAT TGATTATGAA CTAAGAGCAG ACAATGATGT TGAAGTTGAA GAATTAACTC CACAAAGAAT TGATGAAATT CTTAGTCCAG TTGCTGAAGA AATTAAAGGC GGTAAACCTG CACCAACACT CCAAAACGAA GATGATAAAC CTCTTGCCGA GATGGCAGCA AAAGTTTTCC CAAATCTAAA TGAAACTCTT GAAGCAGTTG CACTAGATGG TGATAACAAT GAAATCTTTA AGGTTCCAAT AAGTGAAGTT GTTAGCAAAC TATCAACACA ATCTGGAATC AAATATCTTC TACTAGATGG AATCATCACT CAGAGACTTT TAGAGGGCGC CAAAAACGCA GGAATTGAAT GTGTAGTTGG TCACAGAGTA GCAAAACTAT CAAACTCTGA TGGAATGACT CTCAAAACAT TCGGTGACCT GGGCGTAGCA TAG
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Protein sequence | MPQSGIVKYH VKLSYEVDGL VERADIIGAI FGQTEGLLGP EMNLNELQRV SKVGRIEVSA RTTANTTAGD ALIPMSTDID TCALIAAGIE SIDKVGPFDC KFTLEAIDDV RAAKKDDIVK RAKEIKQKWA TKTVSEGESM LNDVHQGDSK KLTTYGPSKL TCSSGLADSN WVILVEGRAD VINLLRAGYD NALAIEGAKI DESIKELCNS KETVVAFLDG DRAGGFILKE LKSVVPIDYE LRADNDVEVE ELTPQRIDEI LSPVAEEIKG GKPAPTLQNE DDKPLAEMAA KVFPNLNETL EAVALDGDNN EIFKVPISEV VSKLSTQSGI KYLLLDGIIT QRLLEGAKNA GIECVVGHRV AKLSNSDGMT LKTFGDLGVA
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