| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1212 |
|---|
| Symbol | |
|---|
| ID | 5774074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 1111485 |
|---|
| End bp | 1112732 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 641316856 |
|---|
| Product | metallophosphoesterase |
|---|
| Protein accession | YP_001582546 |
|---|
| Protein GI | 161528720 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0420] DNA repair exonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTATAAAT TTGCACATGT TTCAGATATT CACCTAGGAT TTCAAGACAA AAAAGAACTT
CAAAAAATAG AACAAGAGGT ATTTGAAGAA GTGGTTTGCA CATGCATAAA ACAAAAAGTA
GATTTTGTGT TGATTACAGG TGATTTATTT CATAGAAACC TTCCAGAAAT GAGAGTTCAA
AGATTTGCAT TTAAAAATTT CAAAAAACTT TATGATGCAA AAATTCCAAT TTATGTAGTA
TATGGCAGCC ATGATTTTAG CCCTATAGAA TACTCAGTGA TAGATCTACT AACAGATGTG
GGATACTTAA CCAAAGTTTC AAAGGAACAC ACAAACAATG AAAAAACAGA ATTAGATTTT
ACTGAAGACC CAAAAACAAA AGTGAAATTA GTAGGAATTT CAGGCAGAAC AGCAGGAATA
GATAAAGAAA ATTATGAAAA TTTGGAACTA CCAGTACTAG ATAATAGCTT TAAGATATTT
TTGTTTCATA TTGGTATTGA TGAACTAAAC TCTAGTTCAG AAATCGATAC TAATTCAATA
CCCATAGAAT CATTGCCAAA AGGATTCGAC TATTATGCAG GAGGACATGT ACATGTTTTC
TCACACAAAC AGGTTAAGAA TTTAGGAGAA ATATGTTATC CAGGAACCCC ATTTGCAGGA
TATCATAGTG ATTTAGAAGA AAACGCCAAG CAAGTTAAAA GAGGATTTGT AATAGTTGAG
TTTGACAATA AAATTAAAAA TGTAAAATTT TGTGAAATAA AAAAAACAGA TTATGAGTTA
TTAGAATTTA ATGCAAATGG AAAAACCGCA AATGCATTAA ACATAGAGAT TTTAAAAAAA
ATATCACAAA TCATACCCGA AAATAAAATA ATATTATTAA AAGTACAAGG AGAATTGAAA
TCTGGAAAAA CAACCGAAGT GAATTTTATA GAATTTAAAG AAAAATTATT ACAGTCAGGA
GCAAGAGAAG TTAATGTAAA TAGAATTAAT TTATTCTCAA AAAAATACCA TATTGAAAAA
ATTGAAGCAG GGAAAAAAGA AGAGTTAGAA AATAAAATTT TTGAGGAAAA TATTAAAAAA
ATCAAAACTG AGCAACCAGA ACTAAGTGGC GAAAAAGGAA TTCTTTTTGC AAAAGAATTA
CTCCAATTTT TAAAAGAACC AATAAACACA AATGAAAAGA AAATAGATTA TCAAAAAAGA
ATTAGTGCAG CAGTTTTAGC AATGATGGGA ATTGAAATGG AAAAATGA
|
|---|
| Protein sequence | MYKFAHVSDI HLGFQDKKEL QKIEQEVFEE VVCTCIKQKV DFVLITGDLF HRNLPEMRVQ
RFAFKNFKKL YDAKIPIYVV YGSHDFSPIE YSVIDLLTDV GYLTKVSKEH TNNEKTELDF
TEDPKTKVKL VGISGRTAGI DKENYENLEL PVLDNSFKIF LFHIGIDELN SSSEIDTNSI
PIESLPKGFD YYAGGHVHVF SHKQVKNLGE ICYPGTPFAG YHSDLEENAK QVKRGFVIVE
FDNKIKNVKF CEIKKTDYEL LEFNANGKTA NALNIEILKK ISQIIPENKI ILLKVQGELK
SGKTTEVNFI EFKEKLLQSG AREVNVNRIN LFSKKYHIEK IEAGKKEELE NKIFEENIKK
IKTEQPELSG EKGILFAKEL LQFLKEPINT NEKKIDYQKR ISAAVLAMMG IEMEK
|
|---|
| |