Gene Nmar_1156 details

Gene Information

• Locus tag: Nmar_1156
• ID: 5774571
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 1057094
• End bp: 1057711
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 641316799
• Product: cation efflux protein
• Protein accession: YP_001582490
• Protein GI: 161528664
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG1230] Co/Zn/Cd efflux system component

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 35
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCTGACG ATGACGATTT ACCAAAAGAT CTAGCACACA TCACTCCTGC TTATCGTAGA 
GCATTATGGA TAGTTGTTTT GCTTAATGTG GGTTATGGAT TAGTCGAAAT GATTGGAGGA 
TTCTTTGCAG ATTCCCAAGC ACTCAAAGCA GACGCACTAG ATTTTCTAGG AGATGGTTCT 
ATTACATTCT TAGGACTGCT TGCTATAGGA TGGGGGCTTA AACTTCGAGC TCGTTCAGCA 
CTCATTCAAG GAATATTTCT AGGAGTTATG GGAATTGGTG TTCTAGCGTA CACAATTTAC 
CGAACGCAAG TTCTACAAAC CCCTGAAGCT GGACTAATGG GAATACTTGG TTTTGGTGCA 
TTATTGATCA ATGTTATTGC AGTTATCATA TTGCTTCCAC ATCGAAAAGG TGATGCTAAT 
GTTCGTGCAG TATGGCTCTT TAGTAGAAAC GATGCACTTG GAAATATTTT GGTCATAGTC 
GGTGCAGGTT TTGTCTTTTT GACAGACACG TCATTTCCTG ATCTTATTGT AGCAGGCATT 
ATTGCAAGTC TCTTTTTGCA ATCCTCATGG TCAATAATAA AAGATGCACG AAGTGATCTA 
AAAAAATCTG AAGTGTGA 

 

Protein sequence

MSDDDDLPKD LAHITPAYRR ALWIVVLLNV GYGLVEMIGG FFADSQALKA DALDFLGDGS 
ITFLGLLAIG WGLKLRARSA LIQGIFLGVM GIGVLAYTIY RTQVLQTPEA GLMGILGFGA 
LLINVIAVII LLPHRKGDAN VRAVWLFSRN DALGNILVIV GAGFVFLTDT SFPDLIVAGI 
IASLFLQSSW SIIKDARSDL KKSEV