Gene Nmar_1148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1148 
Symbol 
ID5773535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1050213 
End bp1051010 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content39% 
IMG OID641316791 
ProductDSBA oxidoreductase 
Protein accessionYP_001582482 
Protein GI161528656 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0375091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGATT TTGAATTCAT TGAGGATCAA AAACCAGACA AAGAAATCTC TGTAAGCAAA 
TCCACATTTA ATCGGCTAAT TGTGGCAATT GTTGCAGTAT CTATCGTTTC TGCATTTTTG
GGAGGTTATG TAATTGGTGG AGAGACTGCT GAGCCAAAAG AAGTTGTCAT AAGGGAATCT
GTTCCAAACC TGCAACCAAG TACTGCTTCT CAACAACAAT TTGGGCCTCA GATTATTAGA
AACATCTCTT TTGATGATGA TCCTATGAAG GGAAATCCAA ACGCATCAAT TACCATAGTT
GAATTCTCTG ATTTCCAGTG CCCATTTTGC GCAAAATTTC ATGAGACAAC ACTTCCACTA
ATAGAGCAAA ACTATATCCA AACAGGAAAA GTGAACTTTG TTTACAGAGA TTTCCCAATT
CAAAACATTC ATCCAAATGC TGTTCCTGCA GCACTGGCAT CTGAATGCGC TGATGATCAA
GGAAAGTTCT GGGAGATGCA TGACATGATT TTTGAAGACC AACAAATTTG GAAAGACCTG
CCTGTTGCTC AATCTGTTAC ACTTTACAAG CAATATGCAT CAGAACTGGG TCTTGATTCT
ATCGAGTTTG ATTCTTGTTT GGATTCAGGA AAATACATTG AGGAGGTTCA AAATGATCTC
AATGATGGGC GCACGTATGG TGTCTCTGGA ACTCCTGGAT TCTTTGTAGG AAATGCAGAT
ATCGGATTTA CTCCTATATC TGGGGCTCAG CCATACTCTA CATTTCAGAG AGTCATTGAC
GGGCAATTAA ACAGGTAA
 
Protein sequence
MEDFEFIEDQ KPDKEISVSK STFNRLIVAI VAVSIVSAFL GGYVIGGETA EPKEVVIRES 
VPNLQPSTAS QQQFGPQIIR NISFDDDPMK GNPNASITIV EFSDFQCPFC AKFHETTLPL
IEQNYIQTGK VNFVYRDFPI QNIHPNAVPA ALASECADDQ GKFWEMHDMI FEDQQIWKDL
PVAQSVTLYK QYASELGLDS IEFDSCLDSG KYIEEVQNDL NDGRTYGVSG TPGFFVGNAD
IGFTPISGAQ PYSTFQRVID GQLNR