Gene Nmar_1136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1136 
Symbol 
ID5774341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1040200 
End bp1041807 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content36% 
IMG OID641316779 
Productmulticopper oxidase type 3 
Protein accessionYP_001582470 
Protein GI161528644 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2132] Putative multicopper oxidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0174058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATTTT ACACCATTTT GATTTTGTTT ATTATTTTTT CTGGCAGTAT TTTTTTAAGT 
GGTATTGACA GTGCAGATGC ACTAAAGGCT AAAAATGCAA AATCCCCAAA AAGCTTTGGA
AAAGCAACAA GCAATATTGT CTGTGGGGAT AAACTATGCG GTGAAATTCC TCAAAATGTC
TCTGATGGCG GTGCCAAATT ACTTTCAACA GTTTCCTCTG TATCTGTTTC AAACAATGAC
ACATTTGATC TTACTGCAAG TCAAATCACA AAAAACATTG ATGGTAAAAC ACTTCAAATG
TTTGGCTATA ATGAACAAAC TCCTGGCCCT CTATTGATAG TTTCACAAGG CGACGAGATA
ACTGTAAATT TTACCAATAA TCTTGATTTA CCTACTACTG TTCATTGGCA TGGGTTAAGA
CTTGATTCTG CTAGTGATGG AGTGCCTGGA GTTTCACAAG ACCCTGTGCT TCCTGGAGAA
ACTTTTCAAT ATTCTCTAAA ATTCCCTGAC ACTGGAATTT TCTTCTATCA CCCTCATGTA
AAAACAGAAA TGCAAATGGA TATGGGATTG TATGGAAATA TTCTAGTTGA ATCAAAAAAC
TCCGATAATC TCCCTGTAGA CTATGAAATT CCATTATTCC TAGACGATAT TTCGATTGTG
GATAATGAAC TGCAATCATT TGACCCTGAT ATTACCACTC ATACGCTAAT GGGACGATTT
GGAAACACCA TGATTGCTAA TGGGGATGCA AATCTTTCAC TTGAATTCAA ACAGGGCGAT
ATTGTGAGGT TCTACCTCAC AAACGCTGCA AACACCAGAA CTTTTGATTT TGGAATTGAA
CAGCAAAAAA TCAAATTAAT TGCAGATGAT GCAAGTGAAT ATGAAAGACA AGAATTTGTT
GACTCTGTAA TTATGGCATC TTCTGAGAGA AGAACTATTG ATGTATTATT TGAAGAATCA
GGACAGTATG ATATTACACA TTCAACATCT GACAAAACAT ATGTTCTTGG AACTATCTCT
GTCACCCCCT CTTTGAACAA AATTGATTCC AGTTTTTACT CTATAGAACA AAATTCTGAC
ATAGTCCAAG AAATTGATCA GTTTAGAAAA TTCTTCTCTG ATCCTCCTGA CTTGGAACTT
GAATTTGACA TTAAAACAAT GTCTATGGAT GATCATTCAA TGAGTATGGG AGTTCATGAA
AAAGAGATTG ATGAAATTGA ATGGGAAGAT GAAATGCCAA AAATGAATGC GATGTCTGAT
GACGAAAACA CAAAATGGAT TATACGCGAT ATGAATTCCG GAAAAGAAGG ATTTGATATT
GGCTATCAGG TAAATGTTGG GGACGTCAAA AAAATCAGAT TGTACAACAA TCCAGAATCT
GCCCATCCCA TGCAACATCC AATACATATT CACGGACAAC GAGTCTTGGT CTTGTCTGAA
GATGGAATTC CAAATGAGAA TTTGGCCTGG AAAGATTCTG TTTTAGTTCC TACTGGAAAA
ACTGTAGATA TTCTAGTTGA CTTCTCAAAT CCTGGAAATT GGGTTATGCA TTGTCATATT
CTTGAGCATG CAGAAGCTGG AATGATTACT GAAATTACCG TAAATTGA
 
Protein sequence
MKFYTILILF IIFSGSIFLS GIDSADALKA KNAKSPKSFG KATSNIVCGD KLCGEIPQNV 
SDGGAKLLST VSSVSVSNND TFDLTASQIT KNIDGKTLQM FGYNEQTPGP LLIVSQGDEI
TVNFTNNLDL PTTVHWHGLR LDSASDGVPG VSQDPVLPGE TFQYSLKFPD TGIFFYHPHV
KTEMQMDMGL YGNILVESKN SDNLPVDYEI PLFLDDISIV DNELQSFDPD ITTHTLMGRF
GNTMIANGDA NLSLEFKQGD IVRFYLTNAA NTRTFDFGIE QQKIKLIADD ASEYERQEFV
DSVIMASSER RTIDVLFEES GQYDITHSTS DKTYVLGTIS VTPSLNKIDS SFYSIEQNSD
IVQEIDQFRK FFSDPPDLEL EFDIKTMSMD DHSMSMGVHE KEIDEIEWED EMPKMNAMSD
DENTKWIIRD MNSGKEGFDI GYQVNVGDVK KIRLYNNPES AHPMQHPIHI HGQRVLVLSE
DGIPNENLAW KDSVLVPTGK TVDILVDFSN PGNWVMHCHI LEHAEAGMIT EITVN