Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1115 |
Symbol | |
ID | 5774677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1019051 |
End bp | 1019371 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641316757 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001582449 |
Protein GI | 161528623 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0662] Mannose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.378995 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAACTAG AATTTGATTT AACCACGTAT CTAGAAAAAA TCAAAAACAG CAGTGATTAT TTTCACACTT TTATTAATCG AGATAGTTTA GCTGCTGGAG TTTTAGTTCT TCAACCTGGA GAAGAAGATA CACAAACTCC TCATGATAGT GATGAAGTCT ATTATGTGAT TTCTGGTGAT GGATTTTTAC GAATTAAGGA TAAAGATTAC AAGGTTTCAA AAGATAAGCT GTTTTTTGTT GCAAAAGATG TTGAGCATTA TTTTCATGGA AATACAAAAG AGCTCAAAGT TTTGTACTTT TTTGGTGGCC CTGATTCTTA A
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Protein sequence | MKLEFDLTTY LEKIKNSSDY FHTFINRDSL AAGVLVLQPG EEDTQTPHDS DEVYYVISGD GFLRIKDKDY KVSKDKLFFV AKDVEHYFHG NTKELKVLYF FGGPDS
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