Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1066 |
Symbol | |
ID | 5773668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 938826 |
End bp | 940112 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641316708 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_001582400 |
Protein GI | 161528574 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
TIGRFAM ID | [TIGR00458] aspartyl-tRNA synthetase, archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTATTTG TAAAAACTCA CGATATTTCA GAACTCACAT CAGAGTTAAT TGGAAAGCAA GTTGTTTTGG GAGGATGGAT TGAGGATTTA AGAAAGTTGG GAAAGATGTC ATTTATCACG TTACGTGATG TGTCTGGAAT TTCCCAAGTT ATTGTAAAGG GCGAGTTAAA TGATAATCTT GGAGAGATTA ATCGCCAAAG TGTTGTAAGT GTAAAAGGAA TTGTTCAGGA AACTAAAGCA AGAGACTTTG CATTTGAAAT TAAAGCTGAA GAAATTGAAG TGTTAGGAAA AGCAATTCAT CCATTACCAG TTGATCCAAT TGGAAGAGTA GAAAGTAACA TTGACACAAG ATTGAATCAT CGTGCACTAG ACATGAGAAA TCAAAAAACA GCATCGATTT TCAAATTAAG ACATTATGTT TTGCAATCAT TAAGAAAGAC ATTAGTTGGA AAAAAATTCA TTGAAATCAC CACACCGAAA ATTATTGGCA GTGCAAGTGA AGGCGGAGCA AATCTCTTTT CATTAGAATA TTTTGGAAAG AAAGCATACT TGGCACAGAG TCCACAATTA TACAAAGAAC AGATGACAAT AGGATTAGAA AGAGTGTTTG AGATTTCAAA CTTTTATCGA GCAGAAAACT CTCATACCGG AAGACATCTT AGTGAATTTA CTAGTATAGA TATCGAAGCA GCATTCATGG ATTACAATGA TGTCATGGAT GTTTTAGAGT CACTGGTTAT GGACGTGTAC AAGTTTACAT CAGAAAATTG TAAAAAAGAA CAAGAGATAA TCGGCCACAC TATAGAGGTT CCAAAATCAC CATTTGAGAG AATCACATAC AATCAGTGTA TTGAGGAACT AAAGAGTGCA GGAGAAAAGG TGGAATTTGG AGATGATTTG CTCGATTCAC ATCTTAGAAT CATAGGAAAC AATCATCCAG GATTCTTCTT TTTGACTGAC TGGCCTATGA AACTAAAACC ATTTTACATT AGAGAGAAAG ATGAAGACCC AGAACTATCA CGCTCATTTG ACTTGCAATA TGGATATCTA GAGTTGTCCT CAGGTGGAAC AAGGCTTCAC AATCCAGAGA GGTTAAAGAA CAGATTAAGA GAGCAAGATT TGGATCCTGC ACAATTTACT GACCATCTCA AGGCATTTGA TTGGGGAATG CCTCCACATT CGGGATGGGG AATGGGGTTA GACAGGTTGA TGACTACATT GATTGGAATT GATAATGTCC GTGAAGTTGT CTTGTATCCA AGAGATCCTG ACAGATTAAG TCCATAG
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Protein sequence | MVFVKTHDIS ELTSELIGKQ VVLGGWIEDL RKLGKMSFIT LRDVSGISQV IVKGELNDNL GEINRQSVVS VKGIVQETKA RDFAFEIKAE EIEVLGKAIH PLPVDPIGRV ESNIDTRLNH RALDMRNQKT ASIFKLRHYV LQSLRKTLVG KKFIEITTPK IIGSASEGGA NLFSLEYFGK KAYLAQSPQL YKEQMTIGLE RVFEISNFYR AENSHTGRHL SEFTSIDIEA AFMDYNDVMD VLESLVMDVY KFTSENCKKE QEIIGHTIEV PKSPFERITY NQCIEELKSA GEKVEFGDDL LDSHLRIIGN NHPGFFFLTD WPMKLKPFYI REKDEDPELS RSFDLQYGYL ELSSGGTRLH NPERLKNRLR EQDLDPAQFT DHLKAFDWGM PPHSGWGMGL DRLMTTLIGI DNVREVVLYP RDPDRLSP
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