Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1023 |
Symbol | |
ID | 5773220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 902379 |
End bp | 902741 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641316665 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001582357 |
Protein GI | 161528531 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0662] Mannose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTGA GAAAAAATTC AGAAATAGAA TCAATTCAAG GGGCAGAAGG AACAAGCATC AAGCAGTTTT TCCATCCACA CAATACGCTT GAAGGAATAG GATACAGTCT TGCTCAATTT ACACTAGAAC CTGGAAAAGA ATCAAAACTT CACATGCTAA AATCATCTGA AATTTACTAT ATTCTAGAGG GGAAAGCAAA CTTGAGAATT GATGATGAAA TCATGGAACT ACAAAAAGAT GATTCAGCAT ATGTTCCCCC AAACTCTAAA CAAAATATCA AGAACATTGG AGAGGAGAAT TTAAGGTTCC TATGTATAGT AGAGCCAGCA TGGAAAGCAG ATGATGAAAT CATACTAGAA TAG
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Protein sequence | MSLRKNSEIE SIQGAEGTSI KQFFHPHNTL EGIGYSLAQF TLEPGKESKL HMLKSSEIYY ILEGKANLRI DDEIMELQKD DSAYVPPNSK QNIKNIGEEN LRFLCIVEPA WKADDEIILE
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