Gene Nmar_1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1023 
Symbol 
ID5773220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp902379 
End bp902741 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content35% 
IMG OID641316665 
Productcupin 2 domain-containing protein 
Protein accessionYP_001582357 
Protein GI161528531 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTGA GAAAAAATTC AGAAATAGAA TCAATTCAAG GGGCAGAAGG AACAAGCATC 
AAGCAGTTTT TCCATCCACA CAATACGCTT GAAGGAATAG GATACAGTCT TGCTCAATTT
ACACTAGAAC CTGGAAAAGA ATCAAAACTT CACATGCTAA AATCATCTGA AATTTACTAT
ATTCTAGAGG GGAAAGCAAA CTTGAGAATT GATGATGAAA TCATGGAACT ACAAAAAGAT
GATTCAGCAT ATGTTCCCCC AAACTCTAAA CAAAATATCA AGAACATTGG AGAGGAGAAT
TTAAGGTTCC TATGTATAGT AGAGCCAGCA TGGAAAGCAG ATGATGAAAT CATACTAGAA
TAG
 
Protein sequence
MSLRKNSEIE SIQGAEGTSI KQFFHPHNTL EGIGYSLAQF TLEPGKESKL HMLKSSEIYY 
ILEGKANLRI DDEIMELQKD DSAYVPPNSK QNIKNIGEEN LRFLCIVEPA WKADDEIILE