| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0971 |
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| Symbol | |
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| ID | 5774744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 848117 |
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| End bp | 848935 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641316610 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001582305 |
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| Protein GI | 161528479 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0975842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTTT TTGATTCACT TAACCAAATT GAGATAACTG AAACTCTTAG CTTGCTTAGT
CTTTTGATTG GTGGAATAAT CATGGCTGTC GGTGTGATTA TTGCAAGAAC TGTTAGACTC
TTTTTTAAAA AATACTATGC TCCAAAGCTT TCTAAAGACA GTGCAAACAA TATTGGAAAA
TTAATTTATT TTGGAATAAT CGTTATTGCG TTTCTAATTT TTGTATCTAC TACTGGTGTT
GATTTCTCTG GAATGCTTGT AGCTGGAGGT ATATTTGGAG TTGTAATAGG ATTTGCAACA
CAATCTGTAG TTTCTAATTT AATATCTGGA ATTTTCTTGA TGATTGAAAA ACCTGTTAGA
CAAGGAGATT CTGTTGAAAT TCCTGCTGAA AATATTTCTG GTACTTTGAT AGATATCAGC
ACATTCTCTG TTCGTGTTAG ACAGTTTGAT GGGACCATCA TTCGTATCCC TAATGAAAAA
TTCTTTACCT CTAACCTTCG CTCTCTTACC TCTTCTCCTG TAAGACGTTC CCAAGGAATA
GTGGGGATTG CATACAAAGA AGACATTGAT GGTGCAATTC TGGTTCTTCA GAAGGCTATC
GCAAAATCAA TGCCTTTTGT ATTAGTTGAA CCTGCTCCTG AATTTCGTAT TAGTGAATTA
GGTGACAGCA GTGTAAATAT TGAAATCTTG GTTTGGCATC CTCGTGAAGA CTGGGGAGAA
GTTCAACCAA AATTACTCAA AATTGCAAAA AATGCTTTAG ATGAGGCTGG AATAGAAATC
CCATTTCCTC AAAGAGTTAT CTGGCAAGGA AAAGAATAG
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| Protein sequence | MEFFDSLNQI EITETLSLLS LLIGGIIMAV GVIIARTVRL FFKKYYAPKL SKDSANNIGK
LIYFGIIVIA FLIFVSTTGV DFSGMLVAGG IFGVVIGFAT QSVVSNLISG IFLMIEKPVR
QGDSVEIPAE NISGTLIDIS TFSVRVRQFD GTIIRIPNEK FFTSNLRSLT SSPVRRSQGI
VGIAYKEDID GAILVLQKAI AKSMPFVLVE PAPEFRISEL GDSSVNIEIL VWHPREDWGE
VQPKLLKIAK NALDEAGIEI PFPQRVIWQG KE
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