Gene Nmar_0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0883 
Symbol 
ID5774363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand- 
Start bp775045 
End bp775449 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content36% 
IMG OID641316522 
Producthistidine triad (HIT) protein 
Protein accessionYP_001582217 
Protein GI161528391 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.877405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTGTA TCTTTTGTGA TATTTTGGAT GGAAAAAGAG ATGCTCATAT CTTGTATGAA 
GATGATTCTC ATGTTGCATT TTTAGATAGA TATCCGATTG ATGTTGGTCA TAGTTTACTG 
ATCCCGCGTG AGCATCATGA ACGAATTACT GAGATGACTC CTGAAAATGT TGGAAAATTG 
TTCTCACTTG TTCCAAAAAT AGCCAATGCC ATCTTAGTTG GTGCAAAAGC TGATGCATTT 
AGTATTGCCC AAAATAATGG TCGTGCTGCA AAACAGATAA TCCCTCATGT GCACATTCAC 
ATTATTCCTA GATACAACAG CAAAGGAACT ATTTGGACAA AACGACAAAT CTCTACTGAT 
TCTGAACTTG AAGAATTGGC AAAAAAGATT CGTAGTGCTA TTTAG
 
Protein sequence
MTCIFCDILD GKRDAHILYE DDSHVAFLDR YPIDVGHSLL IPREHHERIT EMTPENVGKL 
FSLVPKIANA ILVGAKADAF SIAQNNGRAA KQIIPHVHIH IIPRYNSKGT IWTKRQISTD 
SELEELAKKI RSAI