| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0678 |
|---|
| Symbol | |
|---|
| ID | 5773719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 616743 |
|---|
| End bp | 617561 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641316314 |
|---|
| Product | ribulose-1,5-biphosphate synthetase |
|---|
| Protein accession | YP_001582012 |
|---|
| Protein GI | 161528186 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1635] Flavoprotein involved in thiazole biosynthesis |
|---|
| TIGRFAM ID | [TIGR00292] thiazole biosynthesis enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAAG CAACTGTAGC AGAACAATCA TCAAAAATAT TTACTGACGT ACGTGAAGTT
GAAATTACAC AAGCAATAGC AAATGAATTT CACAAAGTTC TAGTTGATAG AGCAGAGTCA
GATGTAATCA TTATCGGTGC AGGTCCAGCA GGACTTACTG CAAGTAGAGA ACTTTCAAAC
TTGGGTTTCA AAGTTTTAGT TATTGAACAA AACAACTACC TAGGGGGAGG ATATTGGTTA
GGGGGTTATA TGATGAACCC AGTTACAGTT AGAGAACCTG CACAAAAAAT TTGGGACGAA
TTAGGTGTTC CATATCAAAA AGTACAAGAT GGTTTGTATT TGACACCAGG TCCACATGCA
GTTTCAAAAT TAATTGCAGG TGCATGTGAT GCAGGTGTAA AATTCTTACA ACTAACAAAG
TTTGATGACT TGGTTCTAAA GAACGGAAGA GTTGCAGGAA TTGTTGTTAA CTGGATGCCA
GTTTCAGCAT TACCACGTAA CATTACATGT GTTGATCCAG TTGCATTTGA AGCAAAAATA
ATCATCGATG CATCAGGACA CGATTCTGTT GCAGTAAAAA GACTAGTCGA CAGAGGTTTA
GCCGAGTGGA AAGGAATGGA ACCAATGTTT GTAAATGACG GTGAAGAACA TGTTGTTCAC
AAAACAGGTG AAATTTACCC AGGACTAATC GCAGCAGGAA TGTCAGTCAC AGAAACTCAC
GGATTAGCAA GAATGGGACC AACATTTGGT TCAATGTTAT ACTCTGGAAA GAGAGCAGCA
GAGATTGCAG CTGAGAAAAT CAAAGAGTTA GAAAGATAA
|
|---|
| Protein sequence | MQEATVAEQS SKIFTDVREV EITQAIANEF HKVLVDRAES DVIIIGAGPA GLTASRELSN
LGFKVLVIEQ NNYLGGGYWL GGYMMNPVTV REPAQKIWDE LGVPYQKVQD GLYLTPGPHA
VSKLIAGACD AGVKFLQLTK FDDLVLKNGR VAGIVVNWMP VSALPRNITC VDPVAFEAKI
IIDASGHDSV AVKRLVDRGL AEWKGMEPMF VNDGEEHVVH KTGEIYPGLI AAGMSVTETH
GLARMGPTFG SMLYSGKRAA EIAAEKIKEL ER
|
|---|
| |