Gene Nmar_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0558 
Symbol 
ID5773656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand+ 
Start bp499587 
End bp500318 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content42% 
IMG OID641316191 
Producthypothetical protein 
Protein accessionYP_001581892 
Protein GI161528066 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.362885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAATAA CCCAAATGCT CATAAACCCC AGATTATCCA TCCAGTTCAT GGCAGCTGCT 
AAAAAGCAAA CTAAAAAAGA TCTTGAAGAC AAGATTGCCG AATTAGAAGC AAAGCTAAAC 
TCACTTTCAT CTCAGCTTTC AAAACCAGCT GAAGTGAAAC CTGCTGAGAC AAAACCAGCT 
GAAGTGAAAC CTGCTGAGAC AAAACCTGCT GAGACAAAAC CTGCAGAAAC TAAACCAGCT 
GAGACAAAAC CAGCTGAAAC TGCAAAACCA AAACCAACCT TGCCAAAAGG TATGGGTGAA 
AAACCAGCAG AAGCTCCTAA ACCCGAGGAA GCTCCAAAAC CAGCTGAGAC AACCGCACAA 
CCTCCAGCAA CAGTACAAGA TGCTTTAGAG GCCGCATACT ATGATGCTCC AATGACTGAC 
TTCCATCAGT ATAGAGCAAA AGTAACAGGT TATTCTCCAG CTCCTAACAG ATACTTTGTT 
AGAATGACTG CTCCTGTTGG TAAAGTTCCA ACATCTGATT GGAATCAACA AAAAGCATCA 
GTCACTGGTT ACACAGCATG TTCAAACCAA TACTATGCAA CAAGAGCAAG ATTGGCATAT 
CATCCTGCTG ACAAAAGATT TGGAACTTTT AGTGGAGTTA ACATGACTGT TGAAGGCGTT 
GCTGCACAAG CACAACAAGC ACCAACACCA GAACCACCAA AACCAAAAGG TACACTTCCA 
AAAGGTTTCT AA
 
Protein sequence
MVITQMLINP RLSIQFMAAA KKQTKKDLED KIAELEAKLN SLSSQLSKPA EVKPAETKPA 
EVKPAETKPA ETKPAETKPA ETKPAETAKP KPTLPKGMGE KPAEAPKPEE APKPAETTAQ 
PPATVQDALE AAYYDAPMTD FHQYRAKVTG YSPAPNRYFV RMTAPVGKVP TSDWNQQKAS 
VTGYTACSNQ YYATRARLAY HPADKRFGTF SGVNMTVEGV AAQAQQAPTP EPPKPKGTLP 
KGF