Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0521 |
Symbol | |
ID | 5773212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 465432 |
End bp | 466010 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641316154 |
Product | chromosome segregation and condensation protein ScpB |
Protein accession | YP_001581855 |
Protein GI | 161528029 |
COG category | [K] Transcription |
COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGCCAAAA TTGAGAATAT AGATGAAGCA ACAGCAAGAG TAGAGGCTGC ACTTTATTCA GCAGGTAGAC CACTCCGAAT AGAAGACATA GTCAGAGCCT CAGGCACAGA ATCAAGAACA AAGACGCTAG ATATTCTCCA AAACATTATG AAAAAGACAA AATCTGCATT CAAAGCATTA GAAGTAGTCA TACTTCCAGA CGGTTCCTAT GTCATGCAAC TCAAACCAGA ATATAGTGCT ACAGTCAAGA AATACGCATC AAAACCAGTT CTTCCAAATG CCACTCTTAA GACATTATCA TACATTGCAT ATCAACAACC AATATCATCA AAACAACTTG TAGAAGTAAG AGGATCCGGA GTTTATGCAC ATTTGAAAGA ACTCAGACAA TTAGATTACA TTACTCATCA AAATGTTGGA AGAATCAAAA TTTACACCAC AACAGAAAAG TTCCAAAAAT ATTTTGGAAT ACAAGGAGAT GTAGAAGATC TAAAACAGAG ATTATTCTCA AAAGTAAGGA AAACAGCAAG TGCAAGACAG ACAACTCCTG CACCTCAAAT TGTAACAGAA GTAAACTAA
|
Protein sequence | MAKIENIDEA TARVEAALYS AGRPLRIEDI VRASGTESRT KTLDILQNIM KKTKSAFKAL EVVILPDGSY VMQLKPEYSA TVKKYASKPV LPNATLKTLS YIAYQQPISS KQLVEVRGSG VYAHLKELRQ LDYITHQNVG RIKIYTTTEK FQKYFGIQGD VEDLKQRLFS KVRKTASARQ TTPAPQIVTE VN
|
| |