Gene Nmar_0510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0510 
Symbol 
ID5773503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp457316 
End bp458581 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content33% 
IMG OID641316143 
Productglutamyl-tRNA reductase 
Protein accessionYP_001581844 
Protein GI161528018 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAA ACATCATTAA TGCACGTGTA ACTTTTCGTA ATTCACCAAT CCATATTTTA 
GAACGATTTA CAATAAAAGA TATTGAAGAG GCATATGACC AATTCAAAAA ACATTCAGGA
TTGGATGAGT GTGTCATAAT TCAAACATGC AATAGAATTG AATTATTTGG AAAATCAAAG
AGTCAAGAAG TAGACAAGAT AAAGAAGACA TGGGCATCAC TAGCAGGATT AGAAGAGCAA
GTTTTTGATG AAAACATGGA AGTTGAAGAG AACCAAAATG CTTTGCACCA TTTATTGAAA
TTAACATCAG GTTTGGATTC TATGGTACTA GGAGAAGAAC AAATTTTGGG TCAAATTAAA
AATTCTATCA CATCTGCAAG AGAAAGAAAA GCATCAGGTC AGCATCTTAA CACATTATTT
GACAAAGCAA TCAGAATAGG AACTAGAATC AGAAACAATA GTGGGATTGG TAAAGGGGGA
ATTTCAGTTG GTTCAATGGC AGTAAAGCTT GCAGAAGAAA ACATTGATGA ATTAAAAACA
AAAAAGACAT TATTGATTGG AACTGGAGAA GTATCCACAT TAGTTGCAAA ATCATTACAG
AGAAGAGGTT ATGCATTTGA TGTTACCAGT AGAACACTTA GCAGATCAGA AACATTTTGT
GAAACAATGG GAGGAACCCC AGTTAAATTT GAAGAAATTC TTTCAGGATT TGACAATTAT
GATGTAATTT TTGTTGCAAC AACCGCACCA TATTTTCTTG TAACATATGA ACGAATTACA
GAAGCAATGA AAGATAAAAA CAAAGGCATG ATGATTTTGG ATTTATCAAA TCCAAGAACA
GTAGATGAGA AGGTTGCAAC CATAGGTGGA ATAAAACTGA TGAATCTTGA TCAAATTGCA
GAAATGGTTG AAAAGAACAT GAATGCTAGA TTAAACAAGG TCAAAACCGT TGAAAGTATA
ATTAACGAAG AAGTATCTGT ATTAGAAGCC TCGATGAAAA GACTAGAAGC AGAACCATTA
GTAAAAGATG TATTCAAGAA TATTGAATCA CTTAGAGAAA AAGAGTTACA AAAAGCACTT
CAGATGTTAG ATGAAAAAGA TGAGAAAAGA ATCAAAATTA TTGATGAATT AACCAAAGCA
GTAGTAGAGA GTATTGTTTC AACACCAATG AACAATATCA GAAAAGCATC CGAGCAAGGT
AATCCAGAGG TAGTTGACTT GGCAAGCAAG CTCTTTGACT ATAAAAAACA AGAACAGGCT
GACTAA
 
Protein sequence
MSQNIINARV TFRNSPIHIL ERFTIKDIEE AYDQFKKHSG LDECVIIQTC NRIELFGKSK 
SQEVDKIKKT WASLAGLEEQ VFDENMEVEE NQNALHHLLK LTSGLDSMVL GEEQILGQIK
NSITSARERK ASGQHLNTLF DKAIRIGTRI RNNSGIGKGG ISVGSMAVKL AEENIDELKT
KKTLLIGTGE VSTLVAKSLQ RRGYAFDVTS RTLSRSETFC ETMGGTPVKF EEILSGFDNY
DVIFVATTAP YFLVTYERIT EAMKDKNKGM MILDLSNPRT VDEKVATIGG IKLMNLDQIA
EMVEKNMNAR LNKVKTVESI INEEVSVLEA SMKRLEAEPL VKDVFKNIES LREKELQKAL
QMLDEKDEKR IKIIDELTKA VVESIVSTPM NNIRKASEQG NPEVVDLASK LFDYKKQEQA
D