Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0472 |
Symbol | |
ID | 5773658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 425604 |
End bp | 426323 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641316104 |
Product | ArsR family transcriptional regulator |
Protein accession | YP_001581806 |
Protein GI | 161527980 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0123472 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCTG AAAATCCAGA TGACGTACTA ACTGAAAAAA TCAAAATTCT AGCCACCGAT GATGAGAAAA TAAAGTCATT TGGAGAGCTT TTTACGAATG ATTCTAGTCG TGAAATCTTA CAGTTATTGT TCAACGAAGA GATGACTGCA AATCAGATTG CACAAAAGAC AGACATCTCA CTTCAACTAG TAAAATACCA TCTCAACAAA TTGCAGGATT TAGGAGTTGT AAAGATTTCA AAAGTTGAAA AGAATTCAAA ATCTCAAGAC ATGAAAGTTT ACTCTGCAAC AAAATTCAGT ATTGTCATCG TTCCTCCAAA ACTGTCTGAA AAAACTAAAG AAAGCAAACT TTTGGTTCGT TCATTTAGAC ATATCTACAA AGTTGCAGGA CTTGCTATTG CAACCGGCAT TTCAGGGATG TTCTCTTTAT CTCAAATTCA AAACAAACCC ATTCCAGTTC AAAGTGCAAG ACAATTTGCA GCAGTTAAAG AACCATCAAT GCGTATGGAA TCATTTGACG AATCTGCAGA ATCCTTTGTT ACATCTGCTC CTAATCTTAA TACTGAATCT GAAGATCTTT CAGCAGGTAT GGAAATTACT GAAAAAGCAA TTGATTCAGG TGTTTCTGGA ATTGATTTGT CTATACCTTT TGTAATAATT ACAATAATCT TGGGTGGACT AACATTGTAT TATTTTCTCA AATCAAGAAA AAACATTTAA
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Protein sequence | MSAENPDDVL TEKIKILATD DEKIKSFGEL FTNDSSREIL QLLFNEEMTA NQIAQKTDIS LQLVKYHLNK LQDLGVVKIS KVEKNSKSQD MKVYSATKFS IVIVPPKLSE KTKESKLLVR SFRHIYKVAG LAIATGISGM FSLSQIQNKP IPVQSARQFA AVKEPSMRME SFDESAESFV TSAPNLNTES EDLSAGMEIT EKAIDSGVSG IDLSIPFVII TIILGGLTLY YFLKSRKNI
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