| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0402 |
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| Symbol | |
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| ID | 5774257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 361717 |
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| End bp | 363147 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641316031 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001581736 |
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| Protein GI | 161527910 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.144908 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGAGG GTACAGTTAC CACCATCATT CGAAAGATGG TCTTTAAAGC AGAACCATAT
CTTCCTCAAG TTCCAAAACC AAAAAAGAAG ATTCCATTAT CCACTAGATT GCTCTGGTGT
GGAGTTGCAT TACTTATCTA CATGGTAATG GGCCAAACAC CATTATTTGG AGCAACAACC
CCTGAATTTG ACTTCCTAGC ATTTGCTAGA GTAATTTTTG CATCACAACA AGGAACCCTT
GTTGAATTAG GTATTGGGCC GATTGTAACA GCTGGACTCT TGATGCAGTT GTTGAGAGGT
TCAGACATTC TCAAATTTGA CTTTAAGAAA CCAGAGGAAA GAGGTGTATT CCAAACTGCA
ACAAAGATGG TAACTTATGT TGTAATTGTA GCTGAATCTA TTGTATATGG CGTAGCAGTC
TATGGTCCTG GAGTCTCTGA CCCGTCGATA CTGTATGTCA TGGTCGGGCA GCTTATGGCC
GCGTCGATTA TTATCATGTT CTTAGACGAA TTAATTCAGA AAGGCTGGGG CCTTGGTAGT
GGAATCAGTC TCTTCATTAT GGCAGGTGTT GCTCAACAAA TTCTGTGGAG TCTGTTCAGC
CCATTGCCTG CAGGAGATGG AGGAACTATT GGTATCATTC CATACATTGG ACAATCAATC
ATGGCAGGTG ACCTGTCAAA CATCATGTTC CGTTCAAACC AGTTGCCGAG CATCTTCGGT
CTGTGTCTGA CGGCAGGTGT TATACTGATA CTTGTCTTCA CACAAGGAAT GAAGATTGAG
ATTCCAATCG TATCTACAAA ATACAGAGGA TTCTCTGCAG TCTATCCAAT CAAGATGATG
TATGTATCAA ATATTCCAGT TATCTTGGCA TCTGCACTTA CTGCAAACGC CGTCTTTATC
TTCCAGATGT TGTGGGCCAA TGCGAACCCG CGTAACAATA ATTTCTTTAT GAATTTCATA
GCGCAATTCG ACCCGACGAG TCCGTCGACC CCAATTGGTG GTCTTATCTA TTACATCACA
CCACCTAGAG GTCTAGACGT TGCAGCTTTG GATCCTGGAC GTGCAGTTGG CTATGTCCTA
TTCATGATTG GAATTGTAAT TGTATTTGGT AGGTTATGGG TAGAGCTAGG TGGTCTTTCA
CCAAAGAGTG CAGCTCAGAA CTTGCTTGAT GCAGATGTAC AGATTCCTGG ATTTAGAAGA
TCAAACAAAC CCGTTGAAGC ATTGTTGAAC AAGTACATTC CATCAGTCAC CATTATTGGC
TCAGCTATTC TGGGTCTGTT AGCAGGTGCA TCTGATGTCT TGGGTGTATT TGGTTCTGGT
ATCGGAGTTT TACTTATGGT AGATATTCTC ATCAACTATT ACACACAATT AGTTAGAGAA
CAAGTCGAAG TTGTAATGCC GCGATTGGGT GCTTTACTTG GCAGAAAGTA A
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| Protein sequence | MAEGTVTTII RKMVFKAEPY LPQVPKPKKK IPLSTRLLWC GVALLIYMVM GQTPLFGATT
PEFDFLAFAR VIFASQQGTL VELGIGPIVT AGLLMQLLRG SDILKFDFKK PEERGVFQTA
TKMVTYVVIV AESIVYGVAV YGPGVSDPSI LYVMVGQLMA ASIIIMFLDE LIQKGWGLGS
GISLFIMAGV AQQILWSLFS PLPAGDGGTI GIIPYIGQSI MAGDLSNIMF RSNQLPSIFG
LCLTAGVILI LVFTQGMKIE IPIVSTKYRG FSAVYPIKMM YVSNIPVILA SALTANAVFI
FQMLWANANP RNNNFFMNFI AQFDPTSPST PIGGLIYYIT PPRGLDVAAL DPGRAVGYVL
FMIGIVIVFG RLWVELGGLS PKSAAQNLLD ADVQIPGFRR SNKPVEALLN KYIPSVTIIG
SAILGLLAGA SDVLGVFGSG IGVLLMVDIL INYYTQLVRE QVEVVMPRLG ALLGRK
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