| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0299 |
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| Symbol | |
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| ID | 5773456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 265235 |
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| End bp | 266902 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641315925 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_001581633 |
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| Protein GI | 161527807 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase
[COG3959] Transketolase, N-terminal subunit |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0242597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCTCA ATTATTATCA AATTAAGAAA CATGTTCTGA GAGCTCGAAA ATTAGTTATC
AAAGCCACAA ATACTGCTGG TTCAGGTCAT CCAGGCGGTT CATTTTCTAT GGCTGAAATT
TTAGGTTGTT TATTCAACAA ATATCTAAAA TTTGATCCTA AAAATCCACA ATGGGAAGAT
AGAGATCGTT TAGTGTTATC AAAAGGTCAT GCTGCCCCGG GTTTATTTTC AAATATGGCA
GTTGCAGGAT ATTTTCCAGA ATCAGAACTT GAAACTTTGA GAAAATTTGG AAGTAAACTA
CAAGGTCATC CTGATTTGAA ATGTCCTGGT GTTGAATTTT GTGGTGGCTC GTTAGGTACT
GGTTTATCCT ATTCTGTTGG AATTGCACTT GCAGGAAAAA TTGATTCTAA AGACTATCAT
GTCTATACAA TTATTGGAGA TGGAGAATCC GATGAAGGTC AGGTTTGGGA AGCTGCGATG
ACTGCAGCAA AATACAAAGT TGATAATCTT ACTGTTTTTC TTGACAGGAA TTTTATCCAA
CAAGATTCTT ACACTGAAAA AATTATGCCA CTTGACAAAA AGTTAGAAAC TGATGATCTT
TCTGAAATGT GGAAAGATGC TTCTAGATGG AAAACAGGTG ACAAATGGAG ATCTTTTGGT
TGGAATGTAA TTGAAATTGA TGGTCATCGA GTTGAACAGA TTGATGCAGC TATTACAAAA
GCAAATACGA TAAAAGGTGT CCCAACAATA ATTATCTCAA GAACAATTAA AGGAAAAGCT
GTTGAACATA TGGAAGATAA TCCTGCATGG CATGGAAAGG CACCTGATTC TGATGTTGTT
CCAATTATCA ACATGGAATT AGATTCTCAG TTTATGATTG CACCATCAAT TATTGCTGGT
GATATGTCAA ATCTTGAAAA TGAAGTTAAG AGATGTGTTT CTGGAAGAGC TGATTACATT
CATCTAGATG TCATGGATGG TCAATTTGTT CCAAACAAAA CATTTGATCA TATTAAAATC
AAAGAATTAC GTCCACTTAC CGTAATCCCA TTTGATTCTC ATTTGATGAT TAACGAACCT
GTAAAACATG TTAGAGATTA CATTGATGCA GGTAGTGATA TCATTACTGT ACATGCAGAA
GTAACTGATG AATCTAGTTT TGGAGAAATT CATGATGTAT TAAAACAAAA TCAAGTTGGT
ATTGGTTTTG CAATAAATCC TGATACGGAA TTACCTGAAT GGTCTTACAA ATTCATACCT
TCACTTGATC AGCTTATTGT GATGTCTGTA GTTCCCGGAA AATCTGGTCA GAAATACATT
GAGGAAACTC ATGCAAAAAT GGCTAGATTG AATACTATTC TAAACGAGCA TAATTTTTCC
GGATACATTG AGGCTGATGG CGGAGTAAAT CTTGAAAATA TAGGCTCGGT TTTTGCAGAT
GGAGCACGTG CTTTTGTTGG AGGAGGAGCA ATTATCGGAC AACAAGATGT TCGTGCTGCA
ATTAGAGACT TTAGAACTGA AGTATTGTCT TCTAGAAGAC AACTATTGCT TGACAAAGCA
AATGATCTAG GGGGCACTGA ATTAGTTAAC AAATGGATTG GATTGCATGT TGTTGGTGAA
AAACAAGAAC AAATTAAAAA AATTGCAGAG GAGAGAGGAT ACCTTTGA
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| Protein sequence | MGLNYYQIKK HVLRARKLVI KATNTAGSGH PGGSFSMAEI LGCLFNKYLK FDPKNPQWED
RDRLVLSKGH AAPGLFSNMA VAGYFPESEL ETLRKFGSKL QGHPDLKCPG VEFCGGSLGT
GLSYSVGIAL AGKIDSKDYH VYTIIGDGES DEGQVWEAAM TAAKYKVDNL TVFLDRNFIQ
QDSYTEKIMP LDKKLETDDL SEMWKDASRW KTGDKWRSFG WNVIEIDGHR VEQIDAAITK
ANTIKGVPTI IISRTIKGKA VEHMEDNPAW HGKAPDSDVV PIINMELDSQ FMIAPSIIAG
DMSNLENEVK RCVSGRADYI HLDVMDGQFV PNKTFDHIKI KELRPLTVIP FDSHLMINEP
VKHVRDYIDA GSDIITVHAE VTDESSFGEI HDVLKQNQVG IGFAINPDTE LPEWSYKFIP
SLDQLIVMSV VPGKSGQKYI EETHAKMARL NTILNEHNFS GYIEADGGVN LENIGSVFAD
GARAFVGGGA IIGQQDVRAA IRDFRTEVLS SRRQLLLDKA NDLGGTELVN KWIGLHVVGE
KQEQIKKIAE ERGYL
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