Gene Nmar_0281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0281 
Symbol 
ID5774123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp247787 
End bp248284 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content37% 
IMG OID641315905 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001581615 
Protein GI161527789 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00000516884 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGAACTG CAACGGGAAT TATTCGTGCA TTAAACTCGG GAATCAAACA TATTGCAATT 
AAACGATTTA CACTTCGTTA TCCTGAAGAG AAACTCAAGT TTGTAGGTGA TGGTTACCAA
TTTGATCCTT CAACTGGTGT TGGTATAGCT GGACTCAAAG GACGACACAT GTTATTTCAT
GATCACTGTA CTGGATGTCA ATTATGTTCA ATTGCTTGTG AAGGTGTTGC AGAAGCCATT
GCAATGGTAA AAGTTCCTGA AGAGCAAAAA CAAAATAAAA AATCTATCAT GCCTCAAATT
GATTATGGAA AATGTGTTTT CTGTGGTCTT TGTGTTGATG CATGTCCTTT CTATGCGCTT
TACATGACAA ATGATTATGA ATTATCTTCA TTTACTAAAG AAGGTCTGAT TTACACTCCT
GCACAACTTG CAGTAAAACC ATATCTCACA CAAGACAGTG AAATTCAAAT TACTGATAGA
GGTGCAACAC ATGGCTGA
 
Protein sequence
MGTATGIIRA LNSGIKHIAI KRFTLRYPEE KLKFVGDGYQ FDPSTGVGIA GLKGRHMLFH 
DHCTGCQLCS IACEGVAEAI AMVKVPEEQK QNKKSIMPQI DYGKCVFCGL CVDACPFYAL
YMTNDYELSS FTKEGLIYTP AQLAVKPYLT QDSEIQITDR GATHG