Gene Nmar_0277 details

Gene Information

• Locus tag: Nmar_0277
• ID: 5774195
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 244223
• End bp: 244747
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 641315901
• Product: NADH-quinone oxidoreductase subunit B
• Protein accession: YP_001581611
• Protein GI: 161527785
• COG category: [C] Energy production and conversion
• COG ID: [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases
• TIGRFAM ID: [TIGR01957] NADH-quinone oxidoreductase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.000680057
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

TTGCTTAAAG ACTTAGTAAC ACCAGAAAAC GCAAATGTCT TTGTAGGAAA ACTCGGAGAT 
ATTTTAGAAA AAGCAATCGA TAAACCATTG GGCTACGCCA TCAATTGGGG TAGAATTTGG 
TCACTCTGGC CTGTCCACAT TGAAACAGCT TGTTGCAGTG TAGAATTTGG CGCAGCATCA 
AGTCCAAGAT ACGATGTTGA AAGATTTGGT ATCATCGAAG CATTTGGATC ACTTAGACAA 
TGTGATCTAG TTGTTGTTCA AGGAACTATT ACAAGAAAGA TGGCACCACG TCTCAGATTA 
GTTTATGATC AAATGCCAGA ACCAAAGTAC GTAATTGCTA TGGGAGCTTG TGCAATTACT 
GGAGGATTGT ATTTCGATTC ATACAATGTA CTTCCAGGAA TTGACGGAGT AATTCCAGTT 
GATGTCTATG TTCCAGGTTG CCCACCTAGA CCTGAAACTC TCATACAAGG ATGTATTTTG 
TTACAAGAGA AAATTAAGAG AATGAAGGCT AGGAAGTTTG TATAA 

 

Protein sequence

MLKDLVTPEN ANVFVGKLGD ILEKAIDKPL GYAINWGRIW SLWPVHIETA CCSVEFGAAS 
SPRYDVERFG IIEAFGSLRQ CDLVVVQGTI TRKMAPRLRL VYDQMPEPKY VIAMGACAIT 
GGLYFDSYNV LPGIDGVIPV DVYVPGCPPR PETLIQGCIL LQEKIKRMKA RKFV