Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0180 |
Symbol | |
ID | 5774158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 164664 |
End bp | 165335 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641315797 |
Product | NADP oxidoreductase coenzyme F420-dependent |
Protein accession | YP_001581514 |
Protein GI | 161527688 |
COG category | [R] General function prediction only |
COG ID | [COG2085] Predicted dinucleotide-binding enzymes |
TIGRFAM ID | [TIGR01915] NADPH-dependent F420 reductase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.220411 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAG GAATTATTGG CGGTACAGGC GGAATGGGCA AAGGTTTTGC ATTAAGATGG TCTCAAAATC ATGATGTAAT AGTTGGCTCT AGAGATGCTA CAAGAGCATC AGAATCAGCT GTAGAATATA CAAACTTGGC AAAAGAAGCA TTTGGAGAAA TTAAAGGAAG TATTTCTGGA AACGACAATG TTTCAGTTGC AAAAGAAAGT GATGTGTTAA TTTTATCAAT TCCATATGAG AACATTGATT CAGTGTGTTC TGGAATATTG CCAGAAGTAA ATGACAATTG TGTTGTAGTA TCACCAATTG TTCCAATGAC TAAAACAGAT GTTGGGTTTG AGTGTGTTTC AATTAAAGAC AACAAACCAT TCTCATACAA ACTTGTATCA AATCATATGA AGAATAAATC AAAACTAGTA TCAGCATTTC ATGTAATCTC TGAGAAAAAA CTTGTCAATC CAACTTTAGA GTTAGATTAT GACATTTTTG TTTGTGGAGA TGACAAAGAA GCAGTAGGTG TTGTGAATAC ACTAATTGAT GAGATAAGGG GATTAAGATC AATTTACTTG GGACCAATAG AACTATCATA CTTGGCAGAA ATGTCAACTC CATTGTTACT CAATGCAATG ATTCAAAACA AAATAAAAAA TCCCGGAATC AAAATTATCT AA
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Protein sequence | MKVGIIGGTG GMGKGFALRW SQNHDVIVGS RDATRASESA VEYTNLAKEA FGEIKGSISG NDNVSVAKES DVLILSIPYE NIDSVCSGIL PEVNDNCVVV SPIVPMTKTD VGFECVSIKD NKPFSYKLVS NHMKNKSKLV SAFHVISEKK LVNPTLELDY DIFVCGDDKE AVGVVNTLID EIRGLRSIYL GPIELSYLAE MSTPLLLNAM IQNKIKNPGI KII
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