| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0150 |
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| Symbol | |
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| ID | 5774346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 138746 |
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| End bp | 139729 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641315770 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001581488 |
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| Protein GI | 161527662 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000000104251 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAAAAATG CGTTGATTTT TGGACTAACG GGTCAAGATG GCACATATCT AGCGGATTTT
TTGCTTAAGA AAGGATACAA TGTGTTTGGC ACGTTTAGAA GAACTAGTCA TAGATGTTTT
GAAAGATTAG AAGAAATGGA GATTTTTCAC AAAGTGACGG ACATAAAAGC GGATTTATCA
GATTATGGAT CAGTTCAAGC TGCAATTAAA CAATCAGAAC CTGATGAGAT ATACAATTTA
GGAGCTCAAT CATTTGTTGG AGCCTCTTTT CAACAACCAG TTTTAACTTC AGATATAACA
GGTCTTGGTG TTTTAAGAGT ATTAGAAGCA ATTAGAGAAA ATGTTCCAGA TGCAAAATTT
TATCAAGCTT CATCTAGTGA AATGTATGGA AATTATCCTG GAATAAAAAA TGAAGAATCC
CCATTTAGAC CACGAAGTCC GTATGGAGCA GCAAAAGTAT TTGGTCACCA CATGACAAAT
CATTATAAAG AAGCTTACAA TATTTTTGCA TGTTGTGGTA TTTTATTTAA TCATGAATCT
CCTTTAAGAG GCCTTGAATT TGTTACAAGA AAAATTACCT ATGCATTATC AAAAATCAAA
TTTAATACAT TAGATAAATT ACATTTGGGA AATATTAATG CAAAAAGAGA TTGGGGTTTT
GCAGGAGATT ATGTTGAAGC CATGTGGCTT ATGTTACAAC AAAAAGAGCC AGACAACTAT
GTCATTGCAA CTGGTAAATC CCATTCAATT AAGGAGTTTT TAGATATAGC ATCAGAATAT
GCAGGATTAG GAGATTGGCA TGAATTTGTC GAAATTGATG AATCTCTAAT GAGACCAACA
GACATAGAAG ATCTTGTTGG GGATGCATCT AAAGCAAGAA AAAATCTGAA TTGGGAGCCA
AAAACAAGTT TTAAAGAATT AGTTAAAAAA ATGATGGACC ATGATATAGA ATATCACAAA
CAACACCCAT CAAGTCAATA TTAA
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| Protein sequence | MKNALIFGLT GQDGTYLADF LLKKGYNVFG TFRRTSHRCF ERLEEMEIFH KVTDIKADLS
DYGSVQAAIK QSEPDEIYNL GAQSFVGASF QQPVLTSDIT GLGVLRVLEA IRENVPDAKF
YQASSSEMYG NYPGIKNEES PFRPRSPYGA AKVFGHHMTN HYKEAYNIFA CCGILFNHES
PLRGLEFVTR KITYALSKIK FNTLDKLHLG NINAKRDWGF AGDYVEAMWL MLQQKEPDNY
VIATGKSHSI KEFLDIASEY AGLGDWHEFV EIDESLMRPT DIEDLVGDAS KARKNLNWEP
KTSFKELVKK MMDHDIEYHK QHPSSQY
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