| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0109 |
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| Symbol | |
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| ID | 5774233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 99204 |
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| End bp | 100253 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 641315729 |
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| Product | eRF1 domain-containing 1 protein |
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| Protein accession | YP_001581447 |
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| Protein GI | 161527621 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1537] Predicted RNA-binding proteins |
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| TIGRFAM ID | [TIGR00111] probable translation factor pelota |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0000388933 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATAACAA AAAATATTGA TGAGAATTTA ATTTCAGTTA TCCCAGAAGA TTCAGATGAT
CTTCTAAATT TACGCAGAAT TATTAAAGAA AATGATAAAA TAATTGGTGA TACAACCAGA
GTACTAAAAC AAGATAAAGA TTATTCAAGG CCAGATAAAG GGGAAAGAAT CAAAGTTAGA
ATCGCATTAA CTGTAGAAAA GATTTCACTT GATGATGTAT TAGATAGACT AAGAATCAGA
GGTACAATTT CAGAATCAAG TAATGAGTCA GTACCACATG GAACTCATCA TTCATTTATT
TTAAAAATTA ATGATGGTAT TACAATCTCC AAGAAAAAAT GGTTGCCATT TGAAAAAAAT
CTTTTAGAAT CAAGTAACAA TCAAGTTGGT TTTGTACTAG TAGCAATTGA TACAGGAGAC
AGTGGTATTG CAAGATTAAG AGGAACACAT TTGGAATTTA TGCCAAATAT TTACTCAGGT
TCTGGTGGAA AAAGATACAA AACTAATTTT AATATTGAAA AATTCTTTGA GCAAGTACAA
CAAGCAATTT CAACTATTCT TAAAGAAGGA GATTCAATTG TAATTTTTGG TCCAGGTGAA
ACAAAGAAAC GATTTGCAAA TTTTATTCAA AAATCTCAAA ATTTACAAAA ATTCAAAGTA
CAAGTAGTTG AAGGAATAGA TTCCGGTGGA GAAGATGGAA TTTACACCTT TACAAAATCA
AACACAATGA AAGAGATAAT GTCAGATAGC AAACTGGCTA AAGTATCATC AATTATTGAT
GAAGTTATGC TTCTTGCAAA CAAAAAAAGC ACAAAATTTA CCATGGGTTT TGATGAAACC
TTTAATGCAA ATCAAATGGG TGCAGTAGAG TCCATGGTTT TTTCAGATAA AGCAATTCAA
GATGATGAAC AAAAAATGAT AGATTTTCTA AATGATATGG AAAATAAGGG AGTTAAAATG
TATAGTGTGG ATTCGTCTAC AGACATAGGT CTAAGAGTTA CTGGTTTAGG AGGCATAGTT
TCCTTGTTAC GATATTCAAT TGAATCTTAA
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| Protein sequence | MITKNIDENL ISVIPEDSDD LLNLRRIIKE NDKIIGDTTR VLKQDKDYSR PDKGERIKVR
IALTVEKISL DDVLDRLRIR GTISESSNES VPHGTHHSFI LKINDGITIS KKKWLPFEKN
LLESSNNQVG FVLVAIDTGD SGIARLRGTH LEFMPNIYSG SGGKRYKTNF NIEKFFEQVQ
QAISTILKEG DSIVIFGPGE TKKRFANFIQ KSQNLQKFKV QVVEGIDSGG EDGIYTFTKS
NTMKEIMSDS KLAKVSSIID EVMLLANKKS TKFTMGFDET FNANQMGAVE SMVFSDKAIQ
DDEQKMIDFL NDMENKGVKM YSVDSSTDIG LRVTGLGGIV SLLRYSIES
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