Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmag_3138 |
Symbol | |
ID | 8825999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natrialba magadii ATCC 43099 |
Kingdom | Archaea |
Replicon accession | NC_013922 |
Strand | + |
Start bp | 3252223 |
End bp | 3254277 |
Gene Length | 2055 bp |
Protein Length | 684 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | Type II secretion system F domain protein |
Protein accession | YP_003481252 |
Protein GI | 289582786 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.160866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCTCA AAACCGATTC TAGCGCCACC TCTGGGAACG TTTCCGGTGG TTCCGACCTC CTCGGTGAAA CGTTCTACCC CCTCTATGAC GTGCTCTTCA GCGAGGACAG CGAATTCGTC AAGGACGTCG AGACGAAACT CACCCAGGCC CGGATGACCG ATACGGTCGA GATGTACCTC TCTCGGTCGC TCGGCATCGG CTTCATCAGC GGCCTCGCAC TCTGGCTGAT CGGACTGACG CTTGGCTATC TCCTGTTTGC AACCGGACTC ATCGCCGTCG ACGTCATTAT CGGCTTCCCC GTTGGCAACG AGACACTGCT CGCGATCATC GAGGCACTTC GAATTCCGGC GCTCGTCTTC GTCACCGGAC TCATATTCGG GACGATTGGC TTCGCCCTCG GCTTTGGCTC ACTGGTCGCG ATACCCTACT CTCGTGCTTC CGCTCGGAAG CGTGAGATCA ACATGCTGCT CACAGACTCC GTCTCGTTCA TGTACGCGCT GTCGGTCGGT GGCCTGAACC AACTCGAGAT CATCGAGGCG ATGGCCCAGG CCGACGACAC CTACGGCGAG GTCGCAAAGG AGTTCCAGAG CATCGTCAAG GAAACCGAGT ACTTCGACGT CGACTACCGA ACTGCGATCC GAAATCAGGC GATCGAGACG CCGAGCGACG AACTCTCGCA GTTCCTGACG GACATGCTCT CGATCGTCAA CAGCGGCGGT GACATGGAGA GCTTCCTCGA GGACAAGAAA GAAAAGCACA TGCGAACAGC CAAGCAGGAA CAGGAGATCA CCCTCGAGAC GCTCGAACTC TTCGGCGAGA TGTATATGAC GCTCTCGCTG TTCCCACTCC TGTTGATCAT CATCATGGTC GTCATGCAGA TGATCCCGCA GGCGGATGTC ACCAACGAGA TGCTGTACAT GACCGTCTAC GGGCTGATTC CGCTCACAGG GATCGGGTTC CTCGTCCTCG TTTCGACGGT CAAACACGAC GAACCGGGCG ATGGCTTCCT CTCGAACACG ACCGGCGACA AACACGTCCA GAGTGGGTCT GAGCGAGGGC TGTTGAACCT CGGCCTCGTC GAGCAGTTCA CCGGCGAACA CAGCGTCTTC GACCGCATCA AGAACCGCGA GGGGACCCAC GAGACACTCG AGGTGCTCAA GCGACCACAC ATCTTCTTCC GAGATAATCC GCTGTACACC CTCGCAGTCA CGGTTCCGAC GGCACTCGTG GTCGTGACGA CTGCGATGAT GACCGGCGCA GCACCGCTCT CCTGGAGTGC GCTGCTCAAT AACGTCATCT GGGGGACGGT GCTCTACGTC TACATTCCGT TCTACATCAT CGCGATCCCA CTCTCGATCT TCCGCGAGTG GAACGTTCGC CACCGTAACA CCGTCGTCAA GACGCTCTCG GAAGACCTCC GAAAGCTCTC GAGTGCGAAC GACACAGGAC TGACCCTACT CGAGTCGTTC CAATCCGTGG CCGACACGAC GAACGGCAAA CTTGCCCGCG AGTTCGAGTT GATGCACACG AAGGTCAACT ACGGAACGAG TCTGAAGGCG GCGCTCATCG AATTTAACAA CAAGTACCAC ATTCCGCGAC TCGCACGGAC GACGCGGCTC ATTACGGAAG CACAGGAGGC ATCCAACCAG ATCACAGACG TGCTCCGAAC GGCTGCGAGC GCGAGCGAGA ATCACGACGA TATCGAGCGC GAGCGCAAGT CTCGAACCCG GATGCAGGTC GTCATCATTA TCATGACGTT CCTGACGGTG CTCGCCGTGA TCGCGATTCT CAAGACCCAG TTCATCGACA CGATGGCGGG GCTGGAAGCA GGCGGTGGCG ATGCCGGTGC CGACAGTGAA CTCGCCCAGG CAGACCTGAG TGACAACATC AATATCGACA TGCTCTCAGC GTTGTTCTTC CATGCAGTGA CGCTGCAGGG AATCATCTCC GGGTTCATCT GTGGCTATAT CCGCGATGCT GACGTACTGA GCGGACTCAA GTACGCGATC GTGCTGGCGA CGATCGCGCT TCTCGGCTGG ACGCTGGTGG CCTAA
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Protein sequence | MSLKTDSSAT SGNVSGGSDL LGETFYPLYD VLFSEDSEFV KDVETKLTQA RMTDTVEMYL SRSLGIGFIS GLALWLIGLT LGYLLFATGL IAVDVIIGFP VGNETLLAII EALRIPALVF VTGLIFGTIG FALGFGSLVA IPYSRASARK REINMLLTDS VSFMYALSVG GLNQLEIIEA MAQADDTYGE VAKEFQSIVK ETEYFDVDYR TAIRNQAIET PSDELSQFLT DMLSIVNSGG DMESFLEDKK EKHMRTAKQE QEITLETLEL FGEMYMTLSL FPLLLIIIMV VMQMIPQADV TNEMLYMTVY GLIPLTGIGF LVLVSTVKHD EPGDGFLSNT TGDKHVQSGS ERGLLNLGLV EQFTGEHSVF DRIKNREGTH ETLEVLKRPH IFFRDNPLYT LAVTVPTALV VVTTAMMTGA APLSWSALLN NVIWGTVLYV YIPFYIIAIP LSIFREWNVR HRNTVVKTLS EDLRKLSSAN DTGLTLLESF QSVADTTNGK LAREFELMHT KVNYGTSLKA ALIEFNNKYH IPRLARTTRL ITEAQEASNQ ITDVLRTAAS ASENHDDIER ERKSRTRMQV VIIIMTFLTV LAVIAILKTQ FIDTMAGLEA GGGDAGADSE LAQADLSDNI NIDMLSALFF HAVTLQGIIS GFICGYIRDA DVLSGLKYAI VLATIALLGW TLVA
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