| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4563 |
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| Symbol | |
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| ID | 4025331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007961 |
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| Strand | - |
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| Start bp | 19317 |
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| End bp | 20471 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637965062 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_571970 |
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| Protein GI | 92109684 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.87565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGGGGGA TCAAACCGGG GCTCGTCCTG ATCATTGCGA TCGGCATCGT CATCATTGCG
CATCCTGCGT TGGCGCAACA GGACGGCAGC GTTCTGACAA CCGTGGAGAA CTCAGTCGCG
ACGGCCACCA AGGGCTGGCA GTCGACCGTC ATGCAGGCGG CGAAGTCGCT GTTCTGGATG
CTCGCCGGCA TTGAGGTCGG TCTCGCCGCC ATCTGGCTCG CCATTCAGGC TGCCTCGATC
GACGCGTGGT TCGCCGAACT GGTGCGGCGG ATCATGTTCA TCGGCTTCTT CGCCTTCGTT
CTCGACCAGG GACCGACTTT CGCCAAGGCC GTCGTCGACA GCCTCTATCA GATCGGCGCC
GGCGGCGGCT CGGCGTCTCC GGCGGATGTC TTCAATGCCG GTCTCAAGGT CGCGTCCTCG
ATGTCGCAGA ACGCGCAGTT TGGCCTGTTC CAGGATAACG CGCTTGCGAT CGCATCCGTG
TTCGCCATGG TGATCGTGGT GATCTCGTTC TCGCTCGTCG CGGCGATCTT CGTCGCGGTG
ATGGTCGAGA TGTATGTCGG CCTCCTTGCC GGCATGATCA TGCTCGGCCT CGGCGGCTCG
TCCTTCACCA AGGACTTCGC CATCCGCTAC CTCGTCTACG CCTTCTCCAT CGGTATGAAG
CTGATGGCGC TGGTGATGAT CGCCAAGATC GGGTCCGACA GCTTGCTGAG TCTCGCCGAC
CAGACCGGCG CTGGCAAGGA CGCCTTCGTC ACCACGCTTG CGATCGCCGG CATCTCGGTC
GTCGTCTTCA TCATCTCGAT CTACGTGCCT AACATCATGC AAGGCGTCGT CCAGGGCGTC
TCCGTCGGCA GCGGCATGGA GGTGGTGCGC CACGGGACAC AGTCCGCGAG CTTCGCGGCC
GGCAGCGCCG CGCTTGCCAT GGGAGGCGCG CGAGCGGGTG CCGCCGGATA CAGCGCCGCG
CGTGCCGATG GCGCGTCCTT CGGCGCGGCC GCCCTCAAGG GCATGACAGA GGGTATCGGA
ACGGCCGGCG GTGCGCTCGC CTCCGCGGCA CGTGACCGCG CGGTCGGCGC ATCCTTTGGC
TCGACCACGC TCGGCCTCGC CAACGCCAAG CTCGACCGGC AGCGCGCGCA AAAGAGCGCA
ACCCGAAAGG CCTGA
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| Protein sequence | MRGIKPGLVL IIAIGIVIIA HPALAQQDGS VLTTVENSVA TATKGWQSTV MQAAKSLFWM
LAGIEVGLAA IWLAIQAASI DAWFAELVRR IMFIGFFAFV LDQGPTFAKA VVDSLYQIGA
GGGSASPADV FNAGLKVASS MSQNAQFGLF QDNALAIASV FAMVIVVISF SLVAAIFVAV
MVEMYVGLLA GMIMLGLGGS SFTKDFAIRY LVYAFSIGMK LMALVMIAKI GSDSLLSLAD
QTGAGKDAFV TTLAIAGISV VVFIISIYVP NIMQGVVQGV SVGSGMEVVR HGTQSASFAA
GSAALAMGGA RAGAAGYSAA RADGASFGAA ALKGMTEGIG TAGGALASAA RDRAVGASFG
STTLGLANAK LDRQRAQKSA TRKA
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