| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4542 |
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| Symbol | |
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| ID | 4025310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007961 |
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| Strand | + |
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| Start bp | 3995 |
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| End bp | 5131 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637965044 |
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| Product | conjugal transfer protein TraB |
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| Protein accession | YP_571952 |
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| Protein GI | 92109666 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.325638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGCCG CCGCGATTGC CGTCGGTGCT GTGGGCTGGA GCGGCCATGT GCTCGCTTTG
CCGCTCGCCT GCGCCTTCCC GACGTTGTGG GCCTTCGCGC CCTCGCGCTC GGCCTCGGCG
GCGGTGAGCG CGGGCTATTT CCTGGCGGCC TCGCGCGGCC TGCCGCAGGG CGTCGTCAAT
TTCTACGGCA GCGACTTCTC CGTCGGCATC GCTCTCTGGA TCGGCGCTGC CGCCGCCTTC
GTCCTGGTCC ACACCGTGCT CTGGCAGAGG CAGCCGGGAT GGCGAGGGGC GGTTTCGTTC
GGGATCGCTA CGGTCCTGAT GAGCCTGCCG CCGTTCGGCA TCGTGGGATG GGCTGAGCCG
ATCGCGGCGG CCGGTGTGCT GTTTCCCGGT TGGGGATGGT GGGGACTGGC GGCAACCGCC
GCCGTCCTCC CCACCATGAC GACCGGCAAG TGGCCGATCG CGGCGATCGT GGCGACGGGC
TTCTGGGCCT GGTCCGCTGC ACACTGGATC GCGCCGTCTC CGCCGCAAGG CTGGACTGGT
CTCGACACGC GGCTCGGGAG CGCGCTCGGC CGCCCGCCCG ACCTCGAACA AACCCGTGCG
CTCTTTGAGC GCGTAAGCGA GGCAAGAGGC GCCGGCGCTC GCGTTGTCGT GCTGCCGGAG
AGCGCGGCGG GGTTGTGGAC GCCGACCACC AGCGCCTTCT GGATCGATAG CCTCCGCGGC
GCGGACGTCA CGGTGATCGC CGGCGCCGCG ATCGTCGAAC CGGATGGCTA CGACAACGTC
ATGGTGGAGG CCGGCGACGG TCGCGCGCGC GTTCTCTACG GCGAGCGCAT GCCGGTCCCG
GTCTCGATGT GGCAACCCTG GCTGGCTTGG ACCGGGCAGG GCGGCGGCGC CCGGGCCAGC
TTCTTCGGCA ACCCTGTCGT CGAGGTGGCT GGCCGGCGGG TCGCGCCGCT GATCTGCTAC
GAGGAGCTGC TCGTCTGGCC CGTCCTGCAG TCAATGTGGT ACGCGCCCGA CGTGGTCGTT
GCGATCGGCA ACGACTGGTG GACCGCCGGC AGCAGCATCC TCGCCATTCA AAGAGCCAGC
TGTGAGGCCT GGGCGCGCCT GTTCGCCCTG CCGCTTGTGC TCGCGTTCAA CACCTGA
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| Protein sequence | MVAAAIAVGA VGWSGHVLAL PLACAFPTLW AFAPSRSASA AVSAGYFLAA SRGLPQGVVN
FYGSDFSVGI ALWIGAAAAF VLVHTVLWQR QPGWRGAVSF GIATVLMSLP PFGIVGWAEP
IAAAGVLFPG WGWWGLAATA AVLPTMTTGK WPIAAIVATG FWAWSAAHWI APSPPQGWTG
LDTRLGSALG RPPDLEQTRA LFERVSEARG AGARVVVLPE SAAGLWTPTT SAFWIDSLRG
ADVTVIAGAA IVEPDGYDNV MVEAGDGRAR VLYGERMPVP VSMWQPWLAW TGQGGGARAS
FFGNPVVEVA GRRVAPLICY EELLVWPVLQ SMWYAPDVVV AIGNDWWTAG SSILAIQRAS
CEAWARLFAL PLVLAFNT
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