| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4523 |
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| Symbol | |
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| ID | 4025291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007960 |
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| Strand | + |
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| Start bp | 169374 |
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| End bp | 170999 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637965027 |
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| Product | replication protein C |
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| Protein accession | YP_571935 |
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| Protein GI | 92109648 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAGC TGGCGACGCC AATAATGCCC CAATCGTATG AACGCATTTT AGCCCGCACC
ATCCGACTTC AAGGAGATCC GCGTTTTCAC GCCACGGTCT TTGTTTGCCC GCGCGCGGAC
CGTCCCGGCG CGCCCGATCT GCCGCGTATC ACCCACGACA TCACCTTCGA TCGCGTGACG
TTTCAATATG AGGGCGGTGA GACACCTGTC CTCAACAACC TCAGTCTGAA GTTCGATGTC
GGAAAGCGCA TCGCGATCGT CGGACCTAGC GGCTCCGGCA AGAGCACGCT GCTCAATCTT
ATCCTGCGCC TCCGCTTCCG TGGCGGTGGC CACAAGAAGT CGTATCGTAT TGTCGACTTC
AAAGCACCAA CGAGAGGACG CGAATGGAGA TGCTTGGTCA AATCCCGTAA CGCCGTTTGG
ACGACGACCG CTATCGCTCA GCACCGTAAA GGTGCAGCGC GACGTCAGGG AATGTCCCCA
GGGCAAGCCG GTCACAAATG GCACGTATTC CGAAACATAT GCGAGGCGCG GACATCGCTG
CCGGTTTCTG ACCGCGCGCT CGCGGTCCTC AATGCGCTGC TCTCATTTCA TCCTGACACG
GTGTTGACTG CCGGCGCCGC CGATCTCGTC GTATTCCCGT CAAATCGGCT TCTCAGCCTG
CGCGCCCACG GAATGGCCGC TTCGACCTTG CGCCGCCACC TTGCTGGGCT GGTCGATAGC
GGGCTCGTTC TTAGGCGCGA TAGCCCGAAC GGCAAGCGCT ATGCGCGCAA GGCGACTTCG
GGCGATATTG AACAGGCCTT TGGCTTCGAT CTCGGACCGA TCGTAGCCCG CGCCGACGAA
TTCGCCGCTC TGGCCGAGGC CGCGATCGCC AGACGCCAAG CCCTTACCGT TCTTCGCGAG
CGGATCACCT TGGCGCGGCG TGACATCGCC AAGATGATTG CAACTGGCGT GGAGCAACGC
GGCGCCGCCG ATTGGGGATC CCTTCATCGA ACCTTCCGCG ACATCATGGC CCGGCTTCCT
CGCGCCCCGA CGTGCGAAGT CCTTGAACCC ATCGTCGTCG AACTGGCGAT CCTGGCGGAA
ACGATCGTCG GCGTCCTCGA GCGACACCTT GATCCGATCG AGTCCGGCCC TCCAAACTTG
CCCGCCGATC AGATTCCGAA TTCAGCCCCT CAGAGGCCGA ACTCATCCGA ACCGGACCCA
AGACCAGGCG CCCCGGAGAC GGCCGATGCC GACCGGCCCC AATCCGCCGG TGCAATCCCT
ATTCGCATGG TGGTCGAACT CTGTCCCGAT ATCATCGACT ACGCGCGCGA CGGAATTCGT
ACCTCTCAGG ACCTTATTAC GACGGCATCA GCCGTGCGCC CCATGCTCGG CATCAGTCCC
AGCGCCTGGG AAGAGGCCTG CACGGCAATG GGCGACGGAC AAGCCAGCGT GGTGCTCGCC
GCCATCCTGC AACGCGGCGC AGCCATCAAG AGTCCAGGAG GCTATCTCAG AGTCCTGGCC
CGTCGCGCCG CAGCTGGGGA ATTCTCGGTG TGGCCGATGC TGATGGCACT ACGCCGGCAA
GGGCGCGCGG CCCGTGACCG AGACTGCCTC CCGTCTTCCT TCCCGGACGA TTTTTCGCAA
GGGTGA
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| Protein sequence | MNELATPIMP QSYERILART IRLQGDPRFH ATVFVCPRAD RPGAPDLPRI THDITFDRVT
FQYEGGETPV LNNLSLKFDV GKRIAIVGPS GSGKSTLLNL ILRLRFRGGG HKKSYRIVDF
KAPTRGREWR CLVKSRNAVW TTTAIAQHRK GAARRQGMSP GQAGHKWHVF RNICEARTSL
PVSDRALAVL NALLSFHPDT VLTAGAADLV VFPSNRLLSL RAHGMAASTL RRHLAGLVDS
GLVLRRDSPN GKRYARKATS GDIEQAFGFD LGPIVARADE FAALAEAAIA RRQALTVLRE
RITLARRDIA KMIATGVEQR GAADWGSLHR TFRDIMARLP RAPTCEVLEP IVVELAILAE
TIVGVLERHL DPIESGPPNL PADQIPNSAP QRPNSSEPDP RPGAPETADA DRPQSAGAIP
IRMVVELCPD IIDYARDGIR TSQDLITTAS AVRPMLGISP SAWEEACTAM GDGQASVVLA
AILQRGAAIK SPGGYLRVLA RRAAAGEFSV WPMLMALRRQ GRAARDRDCL PSSFPDDFSQ
G
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