Gene Nham_4518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4518 
Symbol 
ID4025286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007960 
Strand
Start bp164899 
End bp165918 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content60% 
IMG OID637965022 
ProductparB-like partition proteins 
Protein accessionYP_571930 
Protein GI92109643 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins
[TIGR03454] plasmid partitioning protein RepB 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGCA AGATCAACTT CGATCTTCCA ACGACGGCGG AGCAGACACC GCACGAAGCG 
CCGCCCGTTT CGCCTGCCAA TCGCGTTCGG CCGTTGTTGG GACTTGATCG CCCGATCAAG
CAATCGAGCG CGCTTGGCGC AATATCGCAA TCGCTTGGTG GCATCTCGGA GAAAGTCAAA
CGGGCGGAAG AGATCGAACA AAAGCTCATC GAAGGCCAGG TGATTGTTGA ACTCGACCCG
GCGCTCATTG ACAATTCTTT CATCCCTGAC CGCATGGAAG CCCCTGAGGA GCAGAACGCG
GCCTTCCGCG AGCTAATTCG AGAGCACGGA CAAAACGTCC CGATTCTCGT TCGGCCAAAG
CCGAGCGATA CAGAGCGCTA CGAGGTGGCC TTCGGTCACC GCCGCCTGCG GGCCGCCCGA
GATCTCGGCA TCAAAGTGCG CGCGGTGGTG CGCACGCTCA CTGATGAGCA ATTGGTCGTC
GCGCAGGGCC AGGAGAACAG CGGGCGCACC GACCTGACTT TCATTGAGCG TGCGCGCTTC
GCTGCGAAAC TCGAAGATCG GAAGTTTTCG CGCGAGATCA TTATGGCATC GCTTAACGTC
GACAAAGCCG CTCTCTCGCG GCTCATCTCG ATCGCGACCC GAGTGCCAGC TGCCGTTATC
GAAGCGATTG GACCGGCACC GGCCTTCGGC CGGGTGCGCT GGCAGGACCT AACGGATCTG
CTGGAGCACG AAGACAATCG CACTCGTGCG ATCGACATGG TCAAGGCCCC AAGCTTTTGC
GCCCTGGAAA CGGATAAACG CTTTGAGACA CTGGCGGCCG GGCTGCGCGA GAAGACGTCG
CGCGCTCGCG CTGAAACGTG GGCGGCCAAG GATGGAACGC CTGCTGCCAA GGTCTCGCGT
GCCGGCAAGA AGCTTACGCT GATATTTGAC GATCGCGTCG CTCCTAAGTT CGGCGACTTT
GTCAGAAAGC GGCTTCAGAC GCTCTACGAC GAATTCAAAG CGGGCGATCC GCCAGCATAA
 
Protein sequence
MARKINFDLP TTAEQTPHEA PPVSPANRVR PLLGLDRPIK QSSALGAISQ SLGGISEKVK 
RAEEIEQKLI EGQVIVELDP ALIDNSFIPD RMEAPEEQNA AFRELIREHG QNVPILVRPK
PSDTERYEVA FGHRRLRAAR DLGIKVRAVV RTLTDEQLVV AQGQENSGRT DLTFIERARF
AAKLEDRKFS REIIMASLNV DKAALSRLIS IATRVPAAVI EAIGPAPAFG RVRWQDLTDL
LEHEDNRTRA IDMVKAPSFC ALETDKRFET LAAGLREKTS RARAETWAAK DGTPAAKVSR
AGKKLTLIFD DRVAPKFGDF VRKRLQTLYD EFKAGDPPA