Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4423 |
Symbol | |
ID | 4025434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007960 |
Strand | - |
Start bp | 68287 |
End bp | 70740 |
Gene Length | 2454 bp |
Protein Length | 817 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637964931 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_571839 |
Protein GI | 92109552 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.332759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCTTT CAACGGCAAC CGACTCCCCA TTCGCGCTTT GGACGGAGGA ACCATCAACG CGACCAAATC GCAGAAAGAT TCGCGCCCGG ATCGGGGGGC TGCATTGCTC GCTTTGCACC GGCACCATCG AGAAAGCGCT CGGCCGCATG CCCGGCGTCG ACAAGGTGGC CGTGAGCCTG ACGCATGAAC AGGCGCTGGT TGAGTACGAT CCAACAATTG CGCGTCCCGA ACATCTGCTC CAAACGTTGC GCGACATCGG CTACACGATT TCCGACCCTC GCAAGCTCAG GGCCTTTGAA GAGGAAGAGC ACGACCTACT GCGCGAGGCC CGGCGTTTCG TTCTCGCGGT TGTTCTCAGT GTCGCGGCGA TTCCCATCAT TGCCGATCCG GCTGTGGGCT GGATCGGATT TCTACCGGCC ATGGTGTGCC TCAGTCTTGG AGGGTTTGTC TTCCTGGTGT TGCGATCAAG CGGATTGTGG ACCGCCATCG GCGCCGCGTT GGGCCTAACG GTCATGGCAC TGAGCCTGCT TTACCTCAAT CTGCAAGGAT ATCTGACGGA CGCAGCACCT TGGCTTGCGG GTGCCTTGGC TCTGATGCTT GTCTTCGGAG TGGGGCGGCA CATTCTCTAC ATGGCCGTTC AGGCGCTTCG CCGTGGCATC CTTAATCAGC ACGTGCTTCT CGAGATCGGC GCGTTCGCAG GGATAGCTGG TGGTATCATC GGGCTGATCC TCGATCGGCC CGGCTATCCC ACCGCGGCCT TCTTCGCCGT TTCGGTGATG GTCGGCACCT ATCATATTTT CTCGGAGTGG CTTTCGCTCA TCGTGAAGAC GCGAAGTTCC CAGGCGGTGA AGCGCCTGCT GGACCTGCAG CCTGAGACCG CGCGCGTCGT GCGCGGCACC GAGGAACTGG AACTGCCGAT TGATGAGGTG AGGATCGGAG ATCTTGTGCG GATTCGCCCC GGCGAGCGCA TCCCCGCAGA TGGTACGGTG GTCGACGGTC ATTCCGGCGT TGACCAATCA TTGGTGACCG GCGAGGCTGT CCCGATCGAG AAGACCGAGG GGGATTCCGT CATCGGCGGC TCGATCAACA GCACGGGCAC CCTCCTGCTG AGGATCACGG CGATCGGAGA AGGCAGCTTC CTGCATCAGG TGATCCGTCA CGTCGAGGAC GCACGGGCGC TGAAGCCCGG CCTTCTTCAT CTCGTTGATC GCGTGCTGCG TGTTTACACG CCGACCGTTC TTTTGATCGC CGCCCTTGCT TTCATCGGCT GGCTCATCGG CTCCTGGCTC GGCACAGGCT ATGTGGACGT AGAACGTGCC GTGTTTGCTG GTCTGAGTGT CCTGGTGATG GGATATCCCT GCGCCATCGG CATTTCAGCG CCGCTCTCCA TCGTACGTGG TGCTGGTCAG GCCGCCGAGC GTGGCATCCT GATGCGGACT GGCGAAGCCT TCCAGGGCTT CCGAACGGTG ACGAAAATCA TCCTCGACAA GACAGGCACG CTCACCGAGG GTCGTCCAAC GGTGCGCGAG ATCAGAGCCA TGGATGTAGG TGAGCAGGAG CTTCTTGCCA TTGCCGCTGC CGCCGAAGCA TCCTCGGAGC ATCCGCTGGC ACGGGCGGTG ATCAAGGCGG CTTTCGATTA CGGCGCAACG CCTCGGGACG TTGAGTCATT CGAGGCGTTC CCCGGAAAGG GTATCGTTGC ACGCATCGAC GCCCGCGAAG TCTTCGTCGG CAGTCCGCGC TTCCTCGCCG ACCGCGATAT TGACCTCACG CCTCTTCGTG AGGCCATTGA CAGCCTGGAG GCCGCCGGAC GCACCGTGAT CGCCGTCGCT CGGGATGGAC ACGCGCTGGG CATTGTCGCC TTGGGCGATG CACTCCGACC GGACGCCGTC TCGGCCATCG CCGCGCTGCG CAAAGCAGGC CTCAGGACGA TCCTCGTCAC TGGTGACAAT GAGCGCGCGG CACAGCGGGT CGGTCGGGAC GTTGGCATCG ACGAGATTCA CGCAGGGGTC TTGCCCCAGG ACAAGGCCAG AATCGTCCGA GAGCTTCAGA TCAACGCCCG GGTCGCGATG GTCGGCGATG GCATCAACGA CGCCCCCGCT CTCATGCAAG CTGATATCGG CATCGCCATG GGTAGCGGCA CCGATATTGC GATCGAGTCG GCGGACATCA TCATCCTGTC CAATCGTCTC GATGCGCTTC CGGTCGCCCG CGATATCAGC CGCCGGAGCT ACAGCAAGAT GGTTCAGAAC GTCGCCCTCG CCTTTCTCTT CAACGGCCTC GGCATTCCAC TTGCTGCCAC CGGCCTGATC CATCCGGTGT GGGCGATGGT GGCGATGGCC GTCAGCGTCA CTGCGATTTT CATCAACTCG CTATGGGGAA CGCCGCGGCT CTTTTTTGAT GCAATCCGGA GTGTCGGGCG TCCGATTGCT CGCACAACAT CGCAGGCGGC GTGA
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Protein sequence | MALSTATDSP FALWTEEPST RPNRRKIRAR IGGLHCSLCT GTIEKALGRM PGVDKVAVSL THEQALVEYD PTIARPEHLL QTLRDIGYTI SDPRKLRAFE EEEHDLLREA RRFVLAVVLS VAAIPIIADP AVGWIGFLPA MVCLSLGGFV FLVLRSSGLW TAIGAALGLT VMALSLLYLN LQGYLTDAAP WLAGALALML VFGVGRHILY MAVQALRRGI LNQHVLLEIG AFAGIAGGII GLILDRPGYP TAAFFAVSVM VGTYHIFSEW LSLIVKTRSS QAVKRLLDLQ PETARVVRGT EELELPIDEV RIGDLVRIRP GERIPADGTV VDGHSGVDQS LVTGEAVPIE KTEGDSVIGG SINSTGTLLL RITAIGEGSF LHQVIRHVED ARALKPGLLH LVDRVLRVYT PTVLLIAALA FIGWLIGSWL GTGYVDVERA VFAGLSVLVM GYPCAIGISA PLSIVRGAGQ AAERGILMRT GEAFQGFRTV TKIILDKTGT LTEGRPTVRE IRAMDVGEQE LLAIAAAAEA SSEHPLARAV IKAAFDYGAT PRDVESFEAF PGKGIVARID AREVFVGSPR FLADRDIDLT PLREAIDSLE AAGRTVIAVA RDGHALGIVA LGDALRPDAV SAIAALRKAG LRTILVTGDN ERAAQRVGRD VGIDEIHAGV LPQDKARIVR ELQINARVAM VGDGINDAPA LMQADIGIAM GSGTDIAIES ADIIILSNRL DALPVARDIS RRSYSKMVQN VALAFLFNGL GIPLAATGLI HPVWAMVAMA VSVTAIFINS LWGTPRLFFD AIRSVGRPIA RTTSQAA
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