| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4419 |
|---|
| Symbol | |
|---|
| ID | 4025279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007960 |
|---|
| Strand | - |
|---|
| Start bp | 65539 |
|---|
| End bp | 66237 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637964927 |
|---|
| Product | cytochrome c biogenesis protein, transmembrane region |
|---|
| Protein accession | YP_571835 |
|---|
| Protein GI | 92109548 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0785] Cytochrome c biogenesis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.269969 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGATA CGGAATCGCT ACGGCTGGCA GTGGAGCATG CGGGCATCGC CGCCGCGGGC
GTCGCGTTTC TGACCGGGCT TGTATTCAGC TTTAATCCCG TTGCTTTGGC TTCGATCCCA
GTCTCGCTCG CCTACGTCAC CAAGGGTCGG AACAAGGACC AGGCATTCCT ATTCGGTGCC
ATGTTCATCC TGGGCATGGT TCTCACCCAT GTGCTTCTCG GCCTGATCGC AGGATTGGGC
GGGAAATGGG CCGCGGATAT TGCTGGACGA GGCTGGGGGC TTTTTCTCGG ACCGTTGTTG
ATCATCCTGG GCCTGATGTG GGTCGGTTGG CTTCGGATAC CGCTGCCATC GTTCGGTTTT
CGAGCAAGCC GCCCAGCCGC CGCGTGGGGA GCTTTCCTTC TCGGAATCCC GTTCGCCATC
GCGGTGTGCC CAATCTGCAC GCCAACCTTG GTGGTTTTGC TCGGTGTCAC GGCGGGAATC
GGGTCGGTCT GGCTTGGAGT GGTGTTGCTT CTTGCGTTCG CTCTCGGCCG CGCCGTGCCC
ATCGCCATCG GCGCCTTCGC CGTCAGTTGG CTTGAAAACC TCAGCCACTT TGCCCGATAC
CGGCGAGGTT TCGAGATTGC TGGTGGCGTG CTCCTGATAG CAATGGGCTT CTACATGTTG
AACGCGGTGT ACATCTGGAT TCCCGAACTG GCGGTCTGA
|
|---|
| Protein sequence | MMDTESLRLA VEHAGIAAAG VAFLTGLVFS FNPVALASIP VSLAYVTKGR NKDQAFLFGA
MFILGMVLTH VLLGLIAGLG GKWAADIAGR GWGLFLGPLL IILGLMWVGW LRIPLPSFGF
RASRPAAAWG AFLLGIPFAI AVCPICTPTL VVLLGVTAGI GSVWLGVVLL LAFALGRAVP
IAIGAFAVSW LENLSHFARY RRGFEIAGGV LLIAMGFYML NAVYIWIPEL AV
|
|---|
| |