| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4415 |
|---|
| Symbol | |
|---|
| ID | 4025275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007960 |
|---|
| Strand | - |
|---|
| Start bp | 62766 |
|---|
| End bp | 64145 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637964923 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_571831 |
|---|
| Protein GI | 92109544 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4645] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.247797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATTCCG CTTCTTCGAA TAGTCCTTCG AGCGCAAACA GGGCCCCCGC ACGCAAGCAG
TCGGAAGTTA AAATGGTACA CACGCCAGCA AACAACACTC TTCCAATCAG CGGACGCGAT
CATCGTCTTG ATCTGTTTCG CGGCATCGCT AACTGGGCGA TCTTTCTTGA TCATATTCCA
AACAACGTTG TCGCGTGGAT CACGATCAGA AACTACGGCT TCAGTGATGC GGCTGAGCTT
TTCATCTTTA TGTCAGGATA TATGACATCG CTGGTTTGCA CGAATATTAT GCGGCGGCGC
GGCTTTGTTG CGGGAATGTC CTGGTTGATG AAGCGCGTCT GGCAGCTTTA CGTCGCTCAC
ATTTTCTTGT TTGTGTTGTA TGCGGCCATG ATCGGCCATA TCGCACAAAG TTACGATAAT
CCTGCGCTCA TAAATGAATT CAATATTGCC GGTTTGGTGA GCAACCCTTT CGACGTCCTT
ACCCAGGGCT TGCTCCTCCG TTTCAAGCCC CTTAACATGG ACGTTCTCCC CCTCTACATT
GTCCTTTTGG CAGGTATCTT GCCAATTTTA TGGCTCATGT TGCGGTTGCC CGATGCTACG
ATGTTGGGAT CATTGTATCT CTACCTCGCT GCGCGACATT TCGGCTGGAA TTTGTCCGCC
TACCCCGAAG GAGCATGGTA TTTCAATCCC TTTACGTGGC AGCTGCTGTT CGTTCTTGGC
GCATGGTTTG CTGTGGGCGG CGCAAAGCGA TCACGCCGTC TCATTCGTTC ACGAAGTCTT
CTTTATGTTG GAGTCGTCTA TTTGCTATTT TCATTCGCAA TGACGATGGC CGGTCATATC
CCGAATCTGG CGAATGAATT TCCAAAATGG CTCTTTGACG CATTCAATCC AAATGACAAG
ACCGACCTCG CTCCTTACCG CGTGATCCAT TTTGCGTTCA TTGCACTGTT GGCGACACGG
CTTCTGCCCG TGAACTGGAG CGGCTTGCAA TGCAGTATTC TTCAACCTCT GATCAAATGC
GGAGAACAGT CTCTCCATGT CTTTTGTTCA GGAATTATCC TGTCATTCTT GGCCCATTTC
GTATTGGAGT CAGGCTCGCA GACCGTGTTG GCACAAATCC TCGTCAGTGT AGCTGGACTT
TCGATAATGA CGGCAATTGC GTACTTCGCG TCTTGGTCCA AGACGTTCGA TAAGCCACGA
TCGCTCGTAT TTTTAGGGCA CTCCGGGAGC GATGTGATCG AGACCGCTGA CAGCGATGAT
GCTGAAGTGC GCTCCAAAAC CGTACTTGCC TGGAGCGACC CGACTTTTCT TACGAAAGGT
AAGAACGGCG GGTACGTGGG GATCGGCAGT CGCAAAAACG TTCACTTGAA GTGTCAATAG
|
|---|
| Protein sequence | MHSASSNSPS SANRAPARKQ SEVKMVHTPA NNTLPISGRD HRLDLFRGIA NWAIFLDHIP
NNVVAWITIR NYGFSDAAEL FIFMSGYMTS LVCTNIMRRR GFVAGMSWLM KRVWQLYVAH
IFLFVLYAAM IGHIAQSYDN PALINEFNIA GLVSNPFDVL TQGLLLRFKP LNMDVLPLYI
VLLAGILPIL WLMLRLPDAT MLGSLYLYLA ARHFGWNLSA YPEGAWYFNP FTWQLLFVLG
AWFAVGGAKR SRRLIRSRSL LYVGVVYLLF SFAMTMAGHI PNLANEFPKW LFDAFNPNDK
TDLAPYRVIH FAFIALLATR LLPVNWSGLQ CSILQPLIKC GEQSLHVFCS GIILSFLAHF
VLESGSQTVL AQILVSVAGL SIMTAIAYFA SWSKTFDKPR SLVFLGHSGS DVIETADSDD
AEVRSKTVLA WSDPTFLTKG KNGGYVGIGS RKNVHLKCQ
|
|---|
| |