Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4268 |
Symbol | |
ID | 4025200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007959 |
Strand | + |
Start bp | 217327 |
End bp | 218319 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637964798 |
Product | transposase, IS4 |
Protein accession | YP_571706 |
Protein GI | 92109418 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.45537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCCAGC TGAGTTTCGC GTCGCTCGAT TATGCGGCCA AGAAGAAGCG CACGAAGCGA GATGTGTTTT TGGCTGAGAT GGCAGGCGTG GTGCCTTGGG TCGCGCTCGA AGCTTTGATC GAGCCGCATT ATCCCAAGGC TGGTCCGAGT GGCGGTCGGC GACCATTTCC ATTGGCCGTG ATGCTACGGA TTTATTGCTT GCAGCAGTGG TACAACCTCT CTGATCCCGG CGCGGAAGAA GTGCTTTACG ACATTTGCTC GATGCGCACG TTCGCGGGTC TGGAGCTCGG ACGCGACACA ATTCCCGATG AGACGACCAT CTTGAACTTC CGGCATCTGC TGGAGCGTCA CGAGTTGACG AAGGCGATAT TCGGCGCGAT TGCGGAGTTT CTGGAGACTC GCGGTGCTCT GCTGCGTGGC GGCACCATTA TCGACGCGAC GCTGATCGCG GCATCGCCAT CGACGAAGAA CAAGGCACAG AAGCGCGACC CCGAGATGCG CTCATCGAAG AAGGGCAACC AGTGGTACTT TGGCATGAAG GCCCACATCG GTGTCGATGC GACAAGCGGG CTCGTGCACA CCGCGGGCGT GACCACAGGC AGTGTGCATG ACGCCAAGGT CATGGATAAT CTGATCCGCG AGGATGATCG TGCGGTGTAT GGCGACAAGG GATATGCCAA CGACCGCAAA CAACGACAGG CGGAAACAGC GGGCGTTCTG TGGGCCGTGA AGGCGAAAGC GAAGCCCGGG CGCCCCCTGT CGATATCGCA ACGCCGGCGC AATCGCCACT TCGGAAAAAT CCGCGCCAAG GTCGAGCACG TGTTCCAGGT GATGAAATGC CAGTTCGGCT ATCGCAAGGT TCGCTATCGC GGCATCGCCA AAAACGGCGT ACAGGTCTTC GCGTTGCTCG CGCTAACGAG GAAAATCGGA AATACCGATT TTTCTCTTCC GTTGCGGATG CCGGATAATC CGAATACGAG CCGTACCCTT TAA
|
Protein sequence | MAQLSFASLD YAAKKKRTKR DVFLAEMAGV VPWVALEALI EPHYPKAGPS GGRRPFPLAV MLRIYCLQQW YNLSDPGAEE VLYDICSMRT FAGLELGRDT IPDETTILNF RHLLERHELT KAIFGAIAEF LETRGALLRG GTIIDATLIA ASPSTKNKAQ KRDPEMRSSK KGNQWYFGMK AHIGVDATSG LVHTAGVTTG SVHDAKVMDN LIREDDRAVY GDKGYANDRK QRQAETAGVL WAVKAKAKPG RPLSISQRRR NRHFGKIRAK VEHVFQVMKC QFGYRKVRYR GIAKNGVQVF ALLALTRKIG NTDFSLPLRM PDNPNTSRTL
|
| |