Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4209 |
Symbol | |
ID | 4025537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007959 |
Strand | + |
Start bp | 166276 |
End bp | 168171 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637964753 |
Product | signal transduction histidine kinase |
Protein accession | YP_571661 |
Protein GI | 92109373 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCAAA GCGGCTCGTG CTCTACGGCC GGCACGCGAA ACTCGCGGGC GAAGGGGGTA TCACCGGCGG GTCGAAGGTT CGCGCCCTTC TTGGCATATT CAAATCGGAT TGGCGCCTCT CCTGAATTCA AGTTCGAACC GGCAATCGTA TGTCACCCGC GCTCGCCCCG TCTCCGCAAT CCGACCAGGT CGCATGGGGG CAAGCGCCAC CGGGCAGGAC CAAGGAATGA AGTGGCTGAC AGCAACCCGC AATTGAAAGC GCCGGTTGAC ACACCGTGCG ATGTTAAGCT TGAGACTGAC GGAGGGGAAG TTAAAGCCGA GGCCAAAGCC GTAACGATGA TCAACTGGTT CAAGACTCCG ACCAACCCAC GCTGGGCTTG GTTTTATTTT CTGATGTTTG GTGGAACTTA CTCGGTACTC TGCATTTTCG GTGCCCTCAC GGCAAACGAT AAGATCTTGT CGTTGATCTG GCCCGCCAAC CCGTTCATGC TCGGTATGCT CATGCGCTTT TCTTTATTGG CGCTTCCCCT GGGCTGGGTC GCTTGTCTTG CCGGATTCGC AATCGCGATC CCGATTATCG GTTGCGGGCT TATGACAGGC GCGGGTCTGG CCGCATATAA TTTCGGTGTC GTGGTCATCG GCTATGTCTT GCTATCCAGG CTCGATCGGG TCGACCAGCG TCTCCAGCGC CTGACTTCGG TTTTCTACCT GCTCTTTGCG GTGGGCGCCG CGTCCATATT CGCCGGCATC GTTGGCTCAA TCATGATCGG TCCTTTATTC CATGATCCGG CAGCAGTAAG CTCCTTTCGG TACTGGTTTT CCGTCGAGCT AATAAACCAG CTGGCTTTTT TGCCGATAAT CCTGTCCTAC CCGGAAGGCC GTAAATGGGG GCGGCGGCAA CTGCCGCAGC CGACCTTTCA CGACCAAGCG CCGATTATTG TGTTGGTGCT CTCGGTCGTC ACGGGGATCT TTTTCGGAGG AGTAGGAGCT CTCGCATTCC CTGTACCGGC CCTTCTCTGG TGCGCAATTT CCTATCGCGT GTTTCTGACG GCCTTACTGA CCTTCGCATT CTGTATATGG GCGATCATGG CGACAACGTT GGGCTACATT GACGTGTCGC ATGTCGATCA ATCGCTAGTG CTGTCGATCA GCATGGGGGC TGCACTTATT ACTCTGGGCC CGCTCATCAT CTCCACGACC ACTGCGACGA GAAATGAAAT CCTTGACCAG CTCAGGCAGC TGGCGGCCGA GCGTGAGATT GTGGCCAATG AACTTGATCA TCGGATCAAG AATCTGTTCG CGCTCGTCAA CGGGCTGATC AGCCTGTCAG TCCGTGGCAA ACCCGAGATG AAACCGCTGG CAGACACACT GAGAAACCGG CTCGTGGCAT TACACCATGC GCATGGTCTT GTTCGCATTC GCACCGGGAC CGCGTCGTCT GACGCTGCCG GGGGATTCAC TTCACTCAAG GAGTTCATCG GTACCCTGCT TCGGCCTTAT GAGGATGGTG AAGACAAACA CTTCGTCGTC GATGGCGATG AAGTGTTCAT CCATGGTAGA ACCGTTACGC CGCTGGCTCT CGTTTTCCAC GAACTAGCGA CAAATTCGAC CAAGTATGGT GCGTTGAATG ATCCGGACGG CGCCTTGGGC GTCCATATCA GCCGCGGCAT TGACGACCTG CGTATCAAGT GGATCGAGAG GGTGCCGGTG AAGACGGGCT ATTCTGATGC CGCGGACAGT GGCTTTGGTT CGAAGCTTCT GGATCTTACA ATCAACAAAC AATTGCAAGG CAGCTATGCC CGTACCTATC CAGAAGGCGG CATGGATATC GAGATCATTC TGCCGGGCAA ACTGTTTGGC GACATCCCAT CCAATCCTTC CCTCTTGTCA TCGTAG
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Protein sequence | MAQSGSCSTA GTRNSRAKGV SPAGRRFAPF LAYSNRIGAS PEFKFEPAIV CHPRSPRLRN PTRSHGGKRH RAGPRNEVAD SNPQLKAPVD TPCDVKLETD GGEVKAEAKA VTMINWFKTP TNPRWAWFYF LMFGGTYSVL CIFGALTAND KILSLIWPAN PFMLGMLMRF SLLALPLGWV ACLAGFAIAI PIIGCGLMTG AGLAAYNFGV VVIGYVLLSR LDRVDQRLQR LTSVFYLLFA VGAASIFAGI VGSIMIGPLF HDPAAVSSFR YWFSVELINQ LAFLPIILSY PEGRKWGRRQ LPQPTFHDQA PIIVLVLSVV TGIFFGGVGA LAFPVPALLW CAISYRVFLT ALLTFAFCIW AIMATTLGYI DVSHVDQSLV LSISMGAALI TLGPLIISTT TATRNEILDQ LRQLAAEREI VANELDHRIK NLFALVNGLI SLSVRGKPEM KPLADTLRNR LVALHHAHGL VRIRTGTASS DAAGGFTSLK EFIGTLLRPY EDGEDKHFVV DGDEVFIHGR TVTPLALVFH ELATNSTKYG ALNDPDGALG VHISRGIDDL RIKWIERVPV KTGYSDAADS GFGSKLLDLT INKQLQGSYA RTYPEGGMDI EIILPGKLFG DIPSNPSLLS S
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