Gene Nham_4114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4114 
Symbol 
ID4025730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007959 
Strand
Start bp72935 
End bp73768 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content60% 
IMG OID637964683 
Producthypothetical protein 
Protein accessionYP_571591 
Protein GI92109303 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCCTC TGCTCAGGGA CAACAACATC CGATTATGGC GCAACGTGAC GCCGGGAGCA 
GGAGCCATCC ATACCATCAA CCGTTGTCCG GGCGTGTCCT CGTTTGCGGA ACGCAAGGAG
ATCGCGCTTT TTCGCGTTCA GAGCTTTTCA AGACGCGAGA CTGGACGCCG ACTTGGCCGA
TCCGTCTCCC GTGAGCTACA ACGCAATGCC GCGACGCGCA GCGGTCGCAT AGAGTATCGC
GCATCGACAG CCCAATGGCA CGCCGAACGA TCGGCCCGAT CTAACCGACC AAGCTTGTGC
TCAACAGAAG CTTGCGCCTT GGAGCCGCGA CTGGCTGGCG TTGTCATGAC CCCAAGCGGC
GCTGCAATCC CTGGTCCCGA CTTTTCGTGG AAGGGCCGTC GGCATGGCCC GCGAAAGGAT
CGGCGAGGGG CCAACGCCTG GAGTCCGAAA CAGATTGCCC GGCGCTTGCC GATCGACTTC
CCGAATGACA AGACGATGCG CATCAGCCAC GAAGCCATCT ATCAAGCACT CTTTGTTCAG
GCCGGCGGCG CTACTCCGCG AGCGGGCCAA AAGCGAGAAC GAAACTTCCA CAATCTCGGC
CGACGACTGT TGCTGAACGC GCTGGCGGTG TTTATCGCGC TCGCGTTCTG GACCTGGTTG
TGCGAGGCCG ATGGAGGTTT TCTCTCGTCG CCGCTTCTCA TCGTCGCACT CATTGTCAAG
GATCATCTGA CGGTAACTCG CCGCAGTTCC CCGCCGGGTA GACCCGGCGC TGCCGGAACT
TACGGCGCGA CAGCACGTTT ATGCCGGACA TGCTTTCAGT TTCAGGAGCT TTAA
 
Protein sequence
MAPLLRDNNI RLWRNVTPGA GAIHTINRCP GVSSFAERKE IALFRVQSFS RRETGRRLGR 
SVSRELQRNA ATRSGRIEYR ASTAQWHAER SARSNRPSLC STEACALEPR LAGVVMTPSG
AAIPGPDFSW KGRRHGPRKD RRGANAWSPK QIARRLPIDF PNDKTMRISH EAIYQALFVQ
AGGATPRAGQ KRERNFHNLG RRLLLNALAV FIALAFWTWL CEADGGFLSS PLLIVALIVK
DHLTVTRRSS PPGRPGAAGT YGATARLCRT CFQFQEL