Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4056 |
Symbol | |
ID | 4025382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007959 |
Strand | - |
Start bp | 19058 |
End bp | 20899 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637964643 |
Product | HipA-like |
Protein accession | YP_571551 |
Protein GI | 92109263 |
COG category | [R] General function prediction only |
COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.970389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCTGC ATCTGGTTGG AGAAAACATC GATAAAGCCC GCAGCCACTA TCAGGCTGAA ACGGGCAAAC TCGTCCAGCT GATGCGCGGC ATCTACGTTG ATGCGGGAGA GGACATCGAG GCGACGGTAC TCAAGCACGC CGTCCGTATC GCAAAATACC TATACCCCAA TGCCTACCTG TCAGCGGCGA GCGCTGTCCT TCTTGGCCCG ACCCGCGACG GTCGCCTGTT CCTGAGCGGG CGGAGAATAC AGCGCACGCG ATTACGCTCA CTTGAAATCA TCCAGAATGC AGCGCCCGAC CATCCGTCGG TCGCCCCCGC GATTGTCGAT GACGGCATGG GAGAATTTCG CATCGATGTC TCGTCGATGC GCCAGCGCTT CCTCGAAGCG TTCCGTCTGC GCAGCGAGCA CGCCGCATCC ATTGATGAAA CGACGCGCGA GACAATAGCG AACCGTCTTA TTGAAGAATA CGGCACCTCT CAGGGGGCTG CCGATGCAAC CTGGTCACTC GCCCGCGAGA ACAAATGGTA TCGCGAGGGC GAGCACGCCG AGCGCTTCCT GCTCCGCCGC CCAGTGTCGG GAGAGCCTGC ACGCAACGAA GCTGCGCTCG ATCTGATCGT GGCGTGGCAC GGCGTTCCGC TCGGCAACCT CACTCATGAT GGCTTTGAAT GGCGCTGGAA TCCCAACAAT CAGAACGGCC CACCGCTCGT CCGCCAAACC ACGCCGGGTA AACTCCCGCC TTTCATTCTA TCATTGCTGC CCGAAGGCTG GCTTGAGTCA GTCCTGAACG ACCGCGACGA GCGCGCGATG CTGCGCTCCG GCAAGCGCTA CATGTCAAAC GTCACAATCG TTGAGCGCGA GAGCGATCTC GCCGCTCTGC CGCCCGACAT ACTGCTGACC CGGCTCGAAC GCTTCACTGA GAACTCACTA TTCACCGGTA GGTATGCGGG GCCAGGTCGC GGCGATTTAG AGCAAAGCTT CGAGCGCAAT CTCGCGGAGA TATTTGCGCG CACGGATACG CCGCGATTAT CAGGCGTTCA GATCAAAGCG CCGATGTTCC TTGATTCTGA CGGTACGCTC TCCCCCAGCA CCGGCAAGCC CTTCACGCAT ATTCTGAAGC CTGCTGGCAC AAGCGGATTT GAGGCCCTGC CGGTTATCGA ATGGCAGTCA CTCGCATTGG GCCGCGCATC CGGCTTTCTA ACGCCTGCGA CGGCGCTTGT TCCCATGCCT GACGGGATGC CGCCCGCGCT CTTGGTGGAG CGGTTCGATA TCAGGACAAG CCTTGATGAC AAACGCCTCC TGGCGCTTGA GGATTTTTGC TCCGTGCTGG GCGTGCCGAC CGAAGCAAAA TACGACGGCA CGATGGAGCG CATCGCGCGG GCTCTAAGAC CCCTATCAAC AGCGCCGGAA GAAGATGTCT TGCTTGTGCT GAAGCGAGCC TTGTTCGCCT GGCTGATTGC CGACGGCGAC ATGCACCTGA AGAACATGGC GCTCCTCAAG GTCGCAGAGC CGGGCAGCGC GCAATTCAAC TCCGTCCGCA TGGCACCGCT CTATGATGCG GTCACAACCC GCGTCTTTCC AAGGTTGGAA AGAGACCGGA TGGCGCTCAA ACTGAACGGC AAAGACGACC GTCTGCGCCG CTCTGATTTC AAGGCATTTG CCAGCACCGC CGGTCTCAAG GCTGCCGATG CGGATACCGC CATCGACGAT CTCGTGACCG CCCTCTTGCG CGCGCTCGAT CATCTGGAAT TACCGCCACT TTTATCTGAC GGCACTCAAG GCGCGAAGAT CGCGGAGCAG ATGCGCGCGA TTGTCCGCGA ACGCATTGAA GGGTTCGCGT AG
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Protein sequence | MPLHLVGENI DKARSHYQAE TGKLVQLMRG IYVDAGEDIE ATVLKHAVRI AKYLYPNAYL SAASAVLLGP TRDGRLFLSG RRIQRTRLRS LEIIQNAAPD HPSVAPAIVD DGMGEFRIDV SSMRQRFLEA FRLRSEHAAS IDETTRETIA NRLIEEYGTS QGAADATWSL ARENKWYREG EHAERFLLRR PVSGEPARNE AALDLIVAWH GVPLGNLTHD GFEWRWNPNN QNGPPLVRQT TPGKLPPFIL SLLPEGWLES VLNDRDERAM LRSGKRYMSN VTIVERESDL AALPPDILLT RLERFTENSL FTGRYAGPGR GDLEQSFERN LAEIFARTDT PRLSGVQIKA PMFLDSDGTL SPSTGKPFTH ILKPAGTSGF EALPVIEWQS LALGRASGFL TPATALVPMP DGMPPALLVE RFDIRTSLDD KRLLALEDFC SVLGVPTEAK YDGTMERIAR ALRPLSTAPE EDVLLVLKRA LFAWLIADGD MHLKNMALLK VAEPGSAQFN SVRMAPLYDA VTTRVFPRLE RDRMALKLNG KDDRLRRSDF KAFASTAGLK AADADTAIDD LVTALLRALD HLELPPLLSD GTQGAKIAEQ MRAIVRERIE GFA
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