| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4054 |
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| Symbol | |
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| ID | 4025380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007959 |
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| Strand | - |
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| Start bp | 13284 |
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| End bp | 16784 |
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| Gene Length | 3501 bp |
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| Protein Length | 1166 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637964642 |
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| Product | hypothetical protein |
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| Protein accession | YP_571550 |
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| Protein GI | 92109262 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3513] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01865] CRISPR-associated protein, Csn1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGTAG AAATTGATTT TCCACATTTT TCAAGAGGCG ATAGCCATCT AGCTATGAAC
AAGAATGAGA TACTCAGAGG CTCGTCTGTT CTGTATCGCC TTGGGCTAGA TCTCGGCTCC
AACTCTCTCG GCTGGTTTGT CACCCATCTT GAGAAACGCG GCGACCGCCA TGAGCCCGTT
GCGCTCGGTC CGGGCGGCGT CCGTATTTTC CCTGATGGGC GTGATCCCCA ATCCGGCACA
TCCAATGCGG TCGATCGGCG GATGGCGCGG GGCGCGCGCA AGCGGCGCGA CCGCTTCGTC
GAACGCCGCA AGGAATTGAT CGCCGCGCTG ATCAAATACA ATCTGCTTCC GGACGATGCA
CGCGAACGCA GGGCGCTTGA GGTCCTCGAC CCCTATGCGC TGCGCAAAAC CGCACTGACA
GATACCCTGC CCGCGCATCA TGTTGGGCGT GCGCTGTTTC ATCTCAACCA GCGCCGCGGT
TTCCAGTCGA ACCGCAAGAC CGACAGCAAG CAGAGCGAGG ACGGCGCTAT CAAGCAGGCG
GCATCCCGCC TTGCGACCGA CAAGGGCAAC GAGACGCTCG GCGTATTCTT CGCCGATATG
CATTTGCGCA AATCCTATGA AGACCGGCAG ACCGCGATCC GCGCAGAACT TGTGCGGCTC
GGCAAGGATC ACCTCACCGG CAACGCCCGC AAGAAAATCT GGGCCAAAGT CCGCAAGCGT
CTGTTCGGCG ACGAGGTGCT TCCGCGAGCG GATGCGCCTC ATGGCGTGCG CGCCCGCGCC
ACCATTACCG GCACCAAGGC GAGCTACGAC TACTATCCGA CGCGCGATAT GCTGCGGGAC
GAGTTCAACG CGATCTGGGC AGGGCAGAGC GCGCACCATG CCACGATCAC GGACGAGGCG
AGGACGGAGA TCGAGCATAT CATCTTCTAC CAGCGCCCGC TGAAGCCTGC GATTGTCGGC
AAATGCACGC TCGACCCCGC AACGCGCCCC TTCAAGGAAG ATCCCGAAGG CTATCGCGCA
CCGTGGTCCC ATCCTTTGGC GCAGCGATTT CGTATTCTCT CGGAGGCGCG TAACCTCGAA
ATCCGCGACA CCGGCAAGGG CTCGCGCAGG CTGACCAAGG AACAGAGCGA TCTCGTCGTG
GCGGCGCTGC TCGCCAACAG GGAAGTGAAA TTCGACAAGC TGCGCACGCT GCTCAAACTT
CCGGCGGAAG CCAGGTTTAA TCTTGAATCC GACCGGCGCG CGGCGCTCGA CGGCGACCAG
ACCGCCGCGC GGCTGTCGGA CAAGAAGGGC TTCAACAAGG CGTGGCGCGG GTTTCCTCCT
GAGCGGCAGA TCGCGATCGT CGCCAGACTG GAAGAGACCG AAGACGAAAA CGAACTGATC
GCATGGCTCG AAAAGGAATG TGCGCTTGAC GGCGCAGCGG CCGCGCGCGT TGCCAATACG
ACGCTGCCGG ACGGCCACTG TCGGCTCGGC CTGCGCGCGA TCAAAAAGAT CGTGCCTATC
ATGCAGGACG GGCTCGATGA GGATGGCGTG GCGGGCGCCG GCTATCACAT CGCGGCCAAG
CGTGCAGGCT ACGACCACGC CAAGCTACCA ACCGGCGAGC AACTCGGCCG TTTGCCGTAT
TATGGCCAGT GGCTACAGGA TGCCGTGGTC GGCAGCGGCG ATGCGCGGGA CCAGAAGGAA
AAGCAGTACG GCCAGTTTCC AAACCCGACC GTGCATATCG GACTCGGGCA ATTGCGCCGC
GTCGTCAACG ACCTGATCGA CAAGTATGGG CCGCCAACCG AGATTTCCAT CGAGTTCACC
CGCGCGCTGA AGCTGTCAGA ACAGCAGAAG GCCGAGCGAC AGCGCGAACA GCGACGGAAT
CAGGACAAGA ATAAAGCGCG CGCCGAGGAG CTTGCCAAAT TCGGCCGTCC GGCAAATCCG
CGCAACCTGC TCAAGATGCG GCTATGGGAA GAACTCGCGC ACGATCCGCT GGATCGCAAA
TGCGTCTATA CCGGCGAGCA GATCAGCATT GAGCGGCTGC TCTCCGACGA AGTCGACATC
GACCATATCC TGCCGGTCGC GATGACGCTG GATGACAGCC CGGCCAACAA GATCATCTGT
ATGCGCTACG CTAACCGCCA CAAGCGCAAG CAGACACCGT CCGAGGCGTT CGGATCGAGC
CCGACGCTTC AGGGCCATCG CTACAATTGG GACGATATCG CAGCCCGCGC CACCGGCCTG
CCACGCAACA AGCGCTGGCG TTTCGATGCC AATGCCCGCG AGGAATTCGA CAAGCGCGGC
GGGTTCCTGG CCCGTCAGTT GAACGAGACC GGCTGGCTGG CGCGACTGGC CAAACAATAT
CTCGGCGCCG TCACCGATCC CAATCAGATC TGGGTGGTGC CGGGCCGTCT CACCAGCATG
CTGCGCGGCA AATGGGGGCT CAACGGTCTC CTGCCATCGG ATAATTACGC CGGCGTGCAG
GACAAAGCGG AGGAATTTCT CGCCTCCACC GACGACATGG AGTTCTCCGG CGTCAAGAAC
CGCGCCGATC ATCGGCATCA CGCCATCGAT GGCCTGGTCA CTGCGCTGAC GGATCGCTCG
CTGCTGTGGA AGATGGCCAA CGCCTACGAC GAAGAGCACG AGAAATTCGT CATCGAGCCG
CCATGGCCGA CAATGCGCGA CGATCTCAAA GCCGCGCTCG AGAAGATGGT GGTCTCGCAC
AAGCCGGATC ACGGCATTGA AGGCAAGTTG CACGAGGACA GCGCCTACGG CTTCGTCAAG
CCGCTGGATG CCACCGGCCT GAAAGAGGAA GAAGCCGGCA ACCTGGTCTA TCGCAAGGCG
ATCGAAAGCC TGAACGAGAA CGAGGTTGAT CGCATCCGTG ACATTCAGCT GCGCACCATC
GTTCGTGACC ATGTGAATGT CGAAAAGACA AAGGGCGTTG CCCTTGCGGA CGCTCTGCGG
CAGTTGCAAG CACCCTCCGA TGACTATCCG CAGTTCAAGC ATGGCTTGCG CCATGTCCGT
ATTCTCAAGA AAGAGAAAGG CGACTATCTC GTCCCAATCG CGAACCGCGC GAGTGGCGTG
GCCTACAAGG CCTACAGCGC CGGCGAGAAT TTCTGCGTCG AGGTATTCGA GACGGCGGGC
GGCAAATGGG ACGGCGAGGC CGTGCGCCGT TTCGATGCCA ACAAGAAAAA CGCTGGCCCA
AAGATAGCGC ACGCGCCGCA ATGGCGTGAC GCCAACGAGG GCGCGAAGCT GGTGATGCGC
ATTCACAAAG GCGACCTGAT CCGGCTCGAC CATGAGGGCC GGGCCCGGAT CATGGTCGTG
CATCGGCTGG ACGCCGCTGC CGGACGGTTC AAGCTCGCCG ACCACAACGA GACTGGCAAT
CTCGACAAGC GCCACGCCAC CAACAACGAC ATCGATCCGT TTCGCTGGCT GATGGCGTCA
TACAATACGT TGAAGAAATT GGCGGCTGTT CCCGTCCGCG TCGATGAACT CGGCCGGGTC
TGGCGCGTCA TGCCGAATTA A
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| Protein sequence | MHVEIDFPHF SRGDSHLAMN KNEILRGSSV LYRLGLDLGS NSLGWFVTHL EKRGDRHEPV
ALGPGGVRIF PDGRDPQSGT SNAVDRRMAR GARKRRDRFV ERRKELIAAL IKYNLLPDDA
RERRALEVLD PYALRKTALT DTLPAHHVGR ALFHLNQRRG FQSNRKTDSK QSEDGAIKQA
ASRLATDKGN ETLGVFFADM HLRKSYEDRQ TAIRAELVRL GKDHLTGNAR KKIWAKVRKR
LFGDEVLPRA DAPHGVRARA TITGTKASYD YYPTRDMLRD EFNAIWAGQS AHHATITDEA
RTEIEHIIFY QRPLKPAIVG KCTLDPATRP FKEDPEGYRA PWSHPLAQRF RILSEARNLE
IRDTGKGSRR LTKEQSDLVV AALLANREVK FDKLRTLLKL PAEARFNLES DRRAALDGDQ
TAARLSDKKG FNKAWRGFPP ERQIAIVARL EETEDENELI AWLEKECALD GAAAARVANT
TLPDGHCRLG LRAIKKIVPI MQDGLDEDGV AGAGYHIAAK RAGYDHAKLP TGEQLGRLPY
YGQWLQDAVV GSGDARDQKE KQYGQFPNPT VHIGLGQLRR VVNDLIDKYG PPTEISIEFT
RALKLSEQQK AERQREQRRN QDKNKARAEE LAKFGRPANP RNLLKMRLWE ELAHDPLDRK
CVYTGEQISI ERLLSDEVDI DHILPVAMTL DDSPANKIIC MRYANRHKRK QTPSEAFGSS
PTLQGHRYNW DDIAARATGL PRNKRWRFDA NAREEFDKRG GFLARQLNET GWLARLAKQY
LGAVTDPNQI WVVPGRLTSM LRGKWGLNGL LPSDNYAGVQ DKAEEFLAST DDMEFSGVKN
RADHRHHAID GLVTALTDRS LLWKMANAYD EEHEKFVIEP PWPTMRDDLK AALEKMVVSH
KPDHGIEGKL HEDSAYGFVK PLDATGLKEE EAGNLVYRKA IESLNENEVD RIRDIQLRTI
VRDHVNVEKT KGVALADALR QLQAPSDDYP QFKHGLRHVR ILKKEKGDYL VPIANRASGV
AYKAYSAGEN FCVEVFETAG GKWDGEAVRR FDANKKNAGP KIAHAPQWRD ANEGAKLVMR
IHKGDLIRLD HEGRARIMVV HRLDAAAGRF KLADHNETGN LDKRHATNND IDPFRWLMAS
YNTLKKLAAV PVRVDELGRV WRVMPN
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