Gene Nham_3962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3962 
Symbol 
ID4031710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp4333796 
End bp4334620 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content63% 
IMG OID637972325 
Producthypothetical protein 
Protein accessionYP_579099 
Protein GI92119370 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0275493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAT CGGCAGCCCC GGGCATCCAA ACCGGCAAGC AACCTTCAGG CATGGCGATC 
AATCGCGCGG GAAATTTGGC CCTGGTTGTC AATCGTGCGG ACAACAGCGT GAGCGTCTTG
TCGATTTCCG GAAAGACCGT CGCCGTCGTC GGCACGGTGG CGCTCGCGCC TGCCGACGCG
CCGAGCCAGC AACCATCCGC CGTGGCCATC ACGCCCGACG GTAAGTGCGC GCTGGTGGCC
AAGGCGACGG CGAACAAGGT CGCCCTCCTC GATATCGATG GTACTACGGT GACCTACAAA
GGTTATGACA TGCTAACTGG CGTGTTTCCG TACAACGTCC AGATCACCGC AGACGGCAGG
CTCGGCCTGG TCAATCACGA CGGCAATGCC GGGGTCGCCG ACGGTCAGGT GAGCACGGTG
GCGGTCATCG ACATGACGCT CGATCCGCCG CGTGAAGTCG ACCAAGTGGT GGTGGGGGAC
GGGCCGGAAG GTTTGGCGGT AAGCCCGACC GGCGCCTATG CCGTGACGCT CCTGACCAAT
GGCTCCGGCG GCTCCGTGCC AAACAAGGCC TTTTTCCGTC ACGACCATGC GGTTGCGGTG
CTTCTCAAGA CCGACGGCAA GAAGGTGCGT AAGCTGGGCG AGACTGAGGT CGGCGCCTTG
GCCGAAGGAA TTGCCTTCAG TCCCGACGGA CAGTTCCTGT ATATTGCCAA TTTGGGCGAA
CAGGAGCTGG CCACTTACCG GCTCGCCGCT AACAAACTGG TGCCAGTGGG TTTACCACTC
AAGCTTCCCG GCCATCCCGC CTCTATGCGC GGCAGCACGC CCTGA
 
Protein sequence
MRKSAAPGIQ TGKQPSGMAI NRAGNLALVV NRADNSVSVL SISGKTVAVV GTVALAPADA 
PSQQPSAVAI TPDGKCALVA KATANKVALL DIDGTTVTYK GYDMLTGVFP YNVQITADGR
LGLVNHDGNA GVADGQVSTV AVIDMTLDPP REVDQVVVGD GPEGLAVSPT GAYAVTLLTN
GSGGSVPNKA FFRHDHAVAV LLKTDGKKVR KLGETEVGAL AEGIAFSPDG QFLYIANLGE
QELATYRLAA NKLVPVGLPL KLPGHPASMR GSTP