| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3712 |
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| Symbol | |
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| ID | 4030582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 4090267 |
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| End bp | 4091352 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637972123 |
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| Product | peptidase S1 and S6, chymotrypsin/Hap |
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| Protein accession | YP_578898 |
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| Protein GI | 92119169 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.530056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAGC AAAGCGACAG GGGACGTGCG GCTCATCGGA GCGAGTGGTT CGGCTGGCTT
GCCGCCGCGG CTATCCTCTG CCTGACGCAG GCCGCGCTGG CCCAGCAGAA CGGCGACTCG
GGGCCGGTGA TTTATGCGAT GGAGGCTCCC GGAGTCGTTC GCATTCACGC GGTCGGGGTA
GCCGAAGACG GGTCCATGGG CGGTGAGGAC GGGACGGGCT TCGTCATCAG CCGCAGCGGC
TACGTGCTGA CGGCGAGCCA CGTGATCCCG CACGATGCGA AATACAAGAC CTTGATCCTG
GGCGGAACGT TGGGGCCCGC GACGGCGGAC GCGAAGCCTT CGCGGCTCGA ACTGGTCAAG
CGAAGCGATT CCTACGACGT CGCCCTGTTG CGGTTCGTTA CACCACCTCC AGGCCTCACG
GTACTCCCGT TGAGGCGCAG CCCAGCAAAG GTGGGCGAGT TGCTCTTCGT GCTCGGTTAT
CCGCTGGGTC TTCCGGATGC GCATTTTCTG GATGGACGGC TCGGGGCCGT GGCGCAAGAT
GCCATAACCA CGAACGCGCT CGTCGATAAG GGCAACAGTG GTGGTCCTGT CGTCGATGCG
CGTGGATGCG TGATCGGGAT AGTCTACGGC GCGATCACAA GCCGCCAAGG ACAACCCGTC
AATGGCATCA AATTCGCGGT ACCAGTGCTC TCGATAAGTG GGATCCTTCC CCCGGACGTA
TCTTCGAGCG CCGCCCAGGA GCCTACCCGG GCGTCCGAAA TAATCCACGT GTCGGATGCT
CTCTCCCGGA CGCAAGAGGA TCACGCGCTG GCTGATACCG TGAGATCCTA CCACGACGTC
ATCCCGGCGC GTGACGGGTT CGTCATCGAG GCGATCGAGG GAGTCGGGCA CGAAAGCCTG
AACCCGCCCC GCCTCCAGTT TCCGACGCCG GTCATCTCGC CGGACAAGAA GTCGATGAGC
TTCGACTACA GCCTCGTCAG CGGGCCCATC TACGACCAGC GGCGCGGTTG GATCGACATG
ACGATCGGCA CAAGACAAAG GCGCATCAGC ACCGCACCGG ATGCGGCGCT GGCCGGCTGC
GAGTAA
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| Protein sequence | MSEQSDRGRA AHRSEWFGWL AAAAILCLTQ AALAQQNGDS GPVIYAMEAP GVVRIHAVGV
AEDGSMGGED GTGFVISRSG YVLTASHVIP HDAKYKTLIL GGTLGPATAD AKPSRLELVK
RSDSYDVALL RFVTPPPGLT VLPLRRSPAK VGELLFVLGY PLGLPDAHFL DGRLGAVAQD
AITTNALVDK GNSGGPVVDA RGCVIGIVYG AITSRQGQPV NGIKFAVPVL SISGILPPDV
SSSAAQEPTR ASEIIHVSDA LSRTQEDHAL ADTVRSYHDV IPARDGFVIE AIEGVGHESL
NPPRLQFPTP VISPDKKSMS FDYSLVSGPI YDQRRGWIDM TIGTRQRRIS TAPDAALAGC
E
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