| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3709 |
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| Symbol | |
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| ID | 4030579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 4084170 |
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| End bp | 4088090 |
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| Gene Length | 3921 bp |
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| Protein Length | 1306 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637972120 |
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| Product | hypothetical protein |
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| Protein accession | YP_578895 |
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| Protein GI | 92119166 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATGG ATGTTCGCAC CCAACAGCCA GTGCTCGACC AGTTGTCCGA GTTCGTTCAC
GATGAGTGCC AGAAGCGCCT AAGAGCCTAC GAGGCTCAGC CACGAGATGC GGCAGAGCAC
TTCGAGACTG AAAATGAGGT GCTCTCGGGA GGGTATGCTT ATCGTCAGCT TTATGAGCTC
GTCCAGAACG CTGCCGATGC AATTCTCGAG GCCGAAGAGC CTCATGGTCG GATCTGTGTG
CGCCTTACTC CCGACCGACT GGAAGCCGCC AATACTGGCG CCGCTCTGGA TGAGGGTGGG
ATTGTTGCAC TCCTGAATGT GCGCAGTTCC CCCAAGCGAG GCAATCAGAT TGGCAGATTT
GGAATCGGGT TCAAGTCGCT CCTCAGGTTG GGCGGGCGGG TCGACCTGAC GTCCAAGTCC
CTGGGTCTGC GGTTCGATCC TGGAGCCTGC CGCAATCGCA TTCGCAATCA CCTCGGGTTG
ACTTCAGACG CACGAGCGCC TGGCATGCGG CTTGCGGAGG TGTTGGATCC GAACGCAAAG
GGCAGCCCAC TTTCCGGCCA AGGCAGGTGG AATTGGGCAA CGACTGTAGT CTCAGCAGAA
ATTGCCGACA AGTCTACCTT CGATCGATTA AAAAAGGAGC TTGCAGAGTT CCCTGCCGAG
TTCCTTTTGT TCCTGCCGTC AGACATTTCC CTCGAGATTG AAGTGGAAGG TGCTGAACCG
CGTCTCATTG CAAAGCGGTT CGAGGAGGGA AACGCCGTCG TGAGCGATGG CGCGAATGAA
TCTATTTGGA AGGTCTTCGG GACCCGCGTG AGGGTCGAGA ATCCGGAAGC ACGCTCTGAT
GCAACCCATA TCCAGGCTCG AGACCAGGTG CCGCTGGCGT GGGCGGCGCC GGTCGGTGGA
CGAGAACAGG CTGGCCGGTT CTGGGCCTTC TTCCCTACTG AGACACAAAG CCGTACCTCC
GGTATTCTGA ACGCACCGTG GAAACTCAAC AGCGACAGGA CCAACCTGAT CCGAGGACCA
TGGAATGAAG CGATCATGCA GGCTGCCGCC GAATTGATCT GTGCCTCGTT AGCGGCACTA
TCTACCCCAA ACGACCATGG TGCCGCTGTA AGCGCCTTCC CGCGTCAACC TGAACGACAG
GACGAGATCG CGATTCCGCT GATCAGAACG CTATGGGATC GCATAGTGGG ATCCGAGATC
CTGCCCAACG TGAATGGCAC GCCGACTAGA CCGGCTGATC TAGCGAGGCA TTTCGTTGAG
GACACGGAGA TCTGCAAGTT TTGGGCTAGC TACGCGAGTA CGAATGCGCG GCAGCGCCAC
CTGCATCCGG ACTGCTATTC CTCTGAGGCG AGAATATCCC GATTAAACAC CCTCGTTGCC
GAAGCAAAAC GCCGCGAGAT AATCGTCCTG CCGAAGCCCT CATCCGAGGA TTGGTTGGAG
TGCATAGCGA CAACCGATTT CGATTCGGCG AAGCGGGTTC TGGCTTTCGT TGGAGGCTTG
TTGAAGGAGC GGTATGACTA TCGCCTATAC AGCATTCCAG AAGCGCGGCT GATATTGACT
GTTGAAGGCG GTCTGGCCTC GCCGTCGGAG GCTGTCATCG TTTCGGGAGC GCCCGCACCA
GCTGGCTTTG TGGCCGTCGC CGCTCAAATT GCGTCGGATC CAGTTTGCAG GGAAATCCTG
ATCGATCAGA TGGAAGTGAG GGTCCTTACG GCAGACTCGT GGGCTAAAGT CCTGAATGCT
TCTCTTGACA CCGCCGACGC TTCGGATTCC CCAGAAGACT GGGAAAACTT CTGGCGCAAT
ATTGCTTCGG CTCCGAGCGA GGCCACGACT GACTTTGTCG ATGATCTCCA TCTTGAGCGG
GTAAAGTTCC GCGCTGTTTC AGGGAAATGG ATAAGCAGGA GCCTGCTGGT CGTAACGGTG
CAACTAGCAG GTATCCCAGA AGACCACGCA ATGGACCTCG CCTTCCGAGA ACATATTGAT
GCCTGTGTCC CAGCAGGTTG GCTTTCAGAG TTTCCATCTG GCGACGAAGC CCCGGATCGC
GATGATCCAG AACTCAAGGA TTACCTACAG TGGCTAAGCC CGCATTTCGA TGCGATTTGC
AAGGAACGTG TGGGCAGCAC GCCCCAGTAT CTCCCAAAGT TCTCCAGCTA CTCGCTTCGA
ATGCCAGCTG GGTGGCGATT GCTTCCGCAT TTGCCGCCAG CTAGGGCTGC GCAACTGACG
AACCAGCTCC TTAGTGCGTG TGATGAATTT TCTGACACCC AATCCAAAGT CACGATTATT
CATCCCACTC AGGAGAAATA TCCGAAGGTG CAAGCGCCTC ATCCAATTTA CCACTGGCTC
ACCGAACATG GACGGATTCG CGTCCGCAGC CTGACAGTTC CAATTAAGTG CTTTTCCGCG
GAGTTCGCAG ACATCTTGGC GCAGTCGGGG ATCCACGGTT TTGATGTTCT TGCGAGCTTC
CTCCGTGCTC GTCATCCGGA AACAGATCTG CGATCGCGCC TTGCTTGGCG AACGTCTAAA
CTCACAGCTC AGTCCAACGC GCGTTTCTGG GAAGAAATCT TCGCCGAGCT TGCGACCAAG
AAGGCGTCCT TTAAAGATCT ACGCACGATT TGGGAGCTAG CTCACAGTGA TGGCGCGATC
CCAGCCACGG TACCGAGCGC CGACGGGCCT CTTCCGCTCG TGGAGATCTA CGTAACAGGC
GATCCAAGCG TCGGGCATGA TCTCGACGAC GGAAGGATCG TGTTATTGTC TGCTGCCGCA
GCTTCTGCGT GGACTGCAGC AGGCGCAAAA ACGCTCGGCT CAGGTCCATC CATGACGTTT
GAGAGCCGGT TGTCATCTCC ATCTTATCTT CTTGACCTGT TTCCAGAGCT AGCATTGGCT
CAAGAAGAAT CCGAGGCGCT TAGACGCCTT CTCGCCGTCT GGGTCAAAGG CCTTGAAGAG
AACGTAGGAC CATTCAGACA TACTGCCGTG CTCGGAATGG ATGCCGATGG CGCGCTTCTA
ATCGACCGCG ACCGTTTCAG AACCCATTGC TGGGCAGAGA GTGCTGAGCT TCTCCTTCGT
TGCCTTGCTC GCCACGGCCT CATCGAGGAC GGGGAGAGTC TCGAAGCAAA GCTAGCCGAA
ATACTGGACC GCCGCTCTGA CGAAGCACGA ACGGCCGTCC GTGCAGAGCC CTCGCTCGAG
CGAAGGTTAT TGAAGGCTAT AAATGGCGAT GTCGCAGTGC TCCTCGACGT TTTGATGCCG
GCCACCCGTC AAGCTGTCGG AGACCAGCTC AATCCGGAGG ATCTTGCTCG GCTCGCGCTC
GCGGTGCACG GGCCGACGCT GCTAAGCAGG CTCCGCGATG CGCTTGAACT CCAAGGCCTT
GCGCCACCGA AACGCTGGGG AGGAGAGCCA GCCCGGGCAT TCGTTCTCGA CCTCGGATTT
CCTGTCGAAT TTGCATCTTC TGTGAGCGGT CGCAGAGACG CCGAATTGTC GGTCAGCGGG
CCTATCAGCT TGCCGCCGCT TCATGACTAC CAGGAGGAGA TCCTCACAAG TGTCGGCGTC
CTCCTCGCTA CAGGGGCCGG GCGCCGTCGA GCTGTAGTCA GTCTGCCGAC TGGCGGCGGC
AAAACCCGTG TCGCCGCTGA AGCGGTGGTG CGACTGGTGT TGCGAGGGGA TGGGCGTCGA
ACAGCGCTAT GGGTTGCCCA AACGGACGAG CTGTGCGAGC AGGCGGTACA GTGCTTCCGG
CAGCTGTGGG CGAAGCCGGT GAGGACCTCC GCGTTGTGCG GCTTTGGGGA GGACAGAGAA
ACCCTGCACC GCCGGAGGGC GACGAAGCAA CGGTGGTCAT CGCAAGCATT CAGACTCTCA
ACAGCCGGAG CGATCGCTCG GAGCTTGCTT GGATCGCGCA GTCTGGAATT GTTATCATTG
ATGAATGTCA CCACGCCATA A
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| Protein sequence | MSMDVRTQQP VLDQLSEFVH DECQKRLRAY EAQPRDAAEH FETENEVLSG GYAYRQLYEL
VQNAADAILE AEEPHGRICV RLTPDRLEAA NTGAALDEGG IVALLNVRSS PKRGNQIGRF
GIGFKSLLRL GGRVDLTSKS LGLRFDPGAC RNRIRNHLGL TSDARAPGMR LAEVLDPNAK
GSPLSGQGRW NWATTVVSAE IADKSTFDRL KKELAEFPAE FLLFLPSDIS LEIEVEGAEP
RLIAKRFEEG NAVVSDGANE SIWKVFGTRV RVENPEARSD ATHIQARDQV PLAWAAPVGG
REQAGRFWAF FPTETQSRTS GILNAPWKLN SDRTNLIRGP WNEAIMQAAA ELICASLAAL
STPNDHGAAV SAFPRQPERQ DEIAIPLIRT LWDRIVGSEI LPNVNGTPTR PADLARHFVE
DTEICKFWAS YASTNARQRH LHPDCYSSEA RISRLNTLVA EAKRREIIVL PKPSSEDWLE
CIATTDFDSA KRVLAFVGGL LKERYDYRLY SIPEARLILT VEGGLASPSE AVIVSGAPAP
AGFVAVAAQI ASDPVCREIL IDQMEVRVLT ADSWAKVLNA SLDTADASDS PEDWENFWRN
IASAPSEATT DFVDDLHLER VKFRAVSGKW ISRSLLVVTV QLAGIPEDHA MDLAFREHID
ACVPAGWLSE FPSGDEAPDR DDPELKDYLQ WLSPHFDAIC KERVGSTPQY LPKFSSYSLR
MPAGWRLLPH LPPARAAQLT NQLLSACDEF SDTQSKVTII HPTQEKYPKV QAPHPIYHWL
TEHGRIRVRS LTVPIKCFSA EFADILAQSG IHGFDVLASF LRARHPETDL RSRLAWRTSK
LTAQSNARFW EEIFAELATK KASFKDLRTI WELAHSDGAI PATVPSADGP LPLVEIYVTG
DPSVGHDLDD GRIVLLSAAA ASAWTAAGAK TLGSGPSMTF ESRLSSPSYL LDLFPELALA
QEESEALRRL LAVWVKGLEE NVGPFRHTAV LGMDADGALL IDRDRFRTHC WAESAELLLR
CLARHGLIED GESLEAKLAE ILDRRSDEAR TAVRAEPSLE RRLLKAINGD VAVLLDVLMP
ATRQAVGDQL NPEDLARLAL AVHGPTLLSR LRDALELQGL APPKRWGGEP ARAFVLDLGF
PVEFASSVSG RRDAELSVSG PISLPPLHDY QEEILTSVGV LLATGAGRRR AVVSLPTGGG
KTRVAAEAVV RLVLRGDGRR TALWVAQTDE LCEQAVQCFR QLWAKPVRTS ALCGFGEDRE
TLHRRRATKQ RWSSQAFRLS TAGAIARSLL GSRSLELLSL MNVTTP
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