Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3708 |
Symbol | |
ID | 4030578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 4083391 |
End bp | 4084278 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637972119 |
Product | helicase-like |
Protein accession | YP_578894 |
Protein GI | 92119165 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCATCG CAAGCATTCA GACTCTCAAC AGCCGGAGCG ATCGCTCGGA GCTTGCTTGG ATCGCGCAGT CTGGAATTGT TATCATTGAT GAATGTCACC ACGCCATAAC CTCCAGCTAC ACTGACCTCC TGCGATGGCT GGATGTTCAG GTCGGCAGCG AAAGAGCGCG CGAGCGCGAG GCACCCGTTC TTGGCCTGAG CGCCACTCCA TGGCGTGGAT ACAACGAGGA CGAGTCGGAG CGGCTGGCGG CACGCTTTGA TCGGCGCTGG TTTCCGGCTG ACCAGGCTGG CCTCCACGAA AAACTCACCG AAATGGGGGT GCTGGCAGAA CGCAGCTACC GGCCGCTACG GTACGAACGA CCGATCACGT TGACTGCGCG CGAACAACAG CACGTGGACA CTTTCGGGGA ACTCCCTGAC AGCGTCGTGG ACCGTATCGG TGAAGATGCC GATCGAAACG ACCTGATTGT CGATGCCGTG CTGAACAGCA CGGCAGAATC CATTCTGCTG TTCGCGAACT CTGTCGCGCA CGCACAATAC CTCGCGGCGA GATTGCACCT CTCGGGTTGT CCCGCGGCGG CAGTCAGTAG CCAAACGGAC AGACTGGCAC GGCAGCATTT TACCCGTCGA TTCCGTGCGG GTGATCTTCG GGTGATCTGC AATCACAGCG TGCTTACAAC CGGCTTCGAC GCACCCAAAG CCGACATGAT CCTGATCTCA AGGCCGGTCT TCAGCCCCGT ACTGTACATG CAGATGGTGG GCCGGGGTCT CAGAGGACCG GCGAACGGCG GTACCGATCA CTGTGAGATC ATGACTGTCG AAGACAATAT CATAAATTTC AGCGATCGCC TCGCCTATCA CTTCTGCAGG CGCTTTTTTG ATACGTGA
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Protein sequence | MVIASIQTLN SRSDRSELAW IAQSGIVIID ECHHAITSSY TDLLRWLDVQ VGSERARERE APVLGLSATP WRGYNEDESE RLAARFDRRW FPADQAGLHE KLTEMGVLAE RSYRPLRYER PITLTAREQQ HVDTFGELPD SVVDRIGEDA DRNDLIVDAV LNSTAESILL FANSVAHAQY LAARLHLSGC PAAAVSSQTD RLARQHFTRR FRAGDLRVIC NHSVLTTGFD APKADMILIS RPVFSPVLYM QMVGRGLRGP ANGGTDHCEI MTVEDNIINF SDRLAYHFCR RFFDT
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