| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3679 |
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| Symbol | |
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| ID | 4033277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 4048324 |
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| End bp | 4049361 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637972091 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_578867 |
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| Protein GI | 92119138 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.520079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGACAT TTCGAGGCGG TCTCCTGATA GGCCTCGCCA TCGCTACCGC CATCGCGGTG
ATGGCGGTCA CCTACGAGCG CTACGACACC AAGACCCTGA AACGGACACT CCGGCGCGAC
GCCGTGCTGT GCGGCGTCAA CACCGGCCTG CCCGGCTTTT CGAATGTGGA TGAGAAGGGC
AACTGGTCCG GCTTCGACGT GGATTTCTGC CGCGCCGTCG CCGCCGCCAT CTTCGACGAT
CCGGCGAAGG TGAAGTTCGT CCCGCTCGCC GCCGACGAAC GCTTCAAGGA ATTGCAAAGC
CGCAAGGTCG ATATTCTCGC GCGCAATTCG ACCTGGAGCA TGTCGCGCGA GACCAATTTC
GACCTCTATT TCCCGGCGGT TGCCTATTAT GACGGCGAGG GCTTCATGGT CCGCACCTCG
CGCAAGGCTG CCTCCGCGCT CGACCTCGGC GGCACCAAGA TCTGCGTGCA GGACGGCACG
ACCACGAAAC TCAACCTTGC CGACTACTTC AAGGCCAACA ACCTGACATA CGAGGAGATC
AAGTTCGGGA AGCTTGAGGA CATGCTGAAG GCCTATGACG AGGCCAAGTG CGATGTAGTG
ACCTCCGACG TTGCCCAACT GTACGCGATG CGCCTGCGGC TGACCAAGCC GAGCGAGAGC
TTCATCCTGC CCGATGTAAT TTCGAAGGAG CCGCTGGCGC CGGTTGTCCG GCAGCGCGAC
GACGACTGGA TGATGATCGT CAAATGGACG CTCTATGCGA TGGTCAATGC CGAGGAACTC
GGCGTCACCT CGAAGAACAT CGACGAGGCG ATGAAGTCGA AGAAGCCCGA TGTGATGCGA
CTGGTCGGCA CCGAGGGAGC GTATGGCGAG GCTCTCGGGC TGACCAAGGA TTGGGCGGCG
CGCATCATCC GCCACGTCGG CAATTACGGC GAGGTCTACG ACCGTAATGT CGGCGCCGAC
TCGAAGCTGA AGATTCCGCG CGGCCTCAAT CAGCTCTGGA ACGCCGGCGG CATCATGTAC
GCTCCGCCGT TACGGTAA
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| Protein sequence | MRTFRGGLLI GLAIATAIAV MAVTYERYDT KTLKRTLRRD AVLCGVNTGL PGFSNVDEKG
NWSGFDVDFC RAVAAAIFDD PAKVKFVPLA ADERFKELQS RKVDILARNS TWSMSRETNF
DLYFPAVAYY DGEGFMVRTS RKAASALDLG GTKICVQDGT TTKLNLADYF KANNLTYEEI
KFGKLEDMLK AYDEAKCDVV TSDVAQLYAM RLRLTKPSES FILPDVISKE PLAPVVRQRD
DDWMMIVKWT LYAMVNAEEL GVTSKNIDEA MKSKKPDVMR LVGTEGAYGE ALGLTKDWAA
RIIRHVGNYG EVYDRNVGAD SKLKIPRGLN QLWNAGGIMY APPLR
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