| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3671 |
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| Symbol | |
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| ID | 4033269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 4042128 |
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| End bp | 4043870 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637972083 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_578859 |
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| Protein GI | 92119130 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCATCC GCCGCCGCGA CCTCCTGAAA GCCGTCGGCG CCGCCGGCCT CTCCGGCGCG
CTGCCGCGCA TCGCCCGCGC GGCCAGCGAT CCCGCGGTGT ATGATCTCGC CGGCTTCGGC
AACGCCCGCA TCCTGCACAT CACCGACACC CACGCGCAGT TGTTGCCGGT GTTCTTCCGC
GAGCCTGGAG TCAATCTCGG CATCGGTACG ATGCAGGGGC AGCCGCCGCA CCTGGTCGGC
CGCGCCTTCC TCGATCGCTT CCGGATCAGG CCCGGCAGCG CCGACGCCTA CGCCTTCACC
TGCCTGGGTT TCGAGAAATC GGCCGCGCGT TTCGGCAGGC TGGGCGGCTT CGCCCACCTC
AAGACGCTGA TCGACCGGCT GCGCGGCGAG GCCAAGCCGA ACAATTCGCT GCTGCTAGAC
GGCGGCGATC TCTGGCAGGG CTCCGGGCTT GCCAACGCCA TGCGCGGCGC CGACATGGTG
GACGCCGCCA ACCTGCTCGG CATCGAAGCG ATGACCGGCC ATTGGGAATT CACCTACGGC
GAAAAAACGC TGCGCGACAA CCTCTCCCGC TTCAACGGCG AATTCCTGGC GCAGAATGTT
TTTCTCACCG AGGAGGCCGC GTTCAACGAC ACGCCGGCCT TCGACGCCGC CTCGGGTCGT
GTGTTCAAGC CGGCGACGAT CAAGCAACTC GGCGGCCATC GCGTCGCCGT GATCGGTCAG
GCGTTTCCCT ATGTGCCGAT CGCGCATCCG AAACGCTTCA CGCCGGACTG GACCTTCGGC
ATTCGCGACG AGGAATTGCA GAAGCTGGTC CGGTCGCTGC GCGATGTCGA CAGGGTCGAT
GCGGTCGTTC TGCTGTCGCA CAACGGCATG GATGTCGATC TCAAGCTCGC AAGCCGCGTC
AGCGGCATCG ACGTCATCCT CGGCGGCCAT ACCCACGACG CCGTGCCGCA GCCGATCGCT
GTCAGCAATG CCGGCGGCAC GACGCTCGTC ACCAATGCCG GCTCGAATGG AAAATTCCTC
GGCGTGCTCG ACCTCGAGCT TGCCAAAGGC AAGGTGCGCG ACGTACGCTA CCACCTGCTG
CCGGTGTTCT CCGAGCTGCT CAAGCCCGAT CCTGCGATGG AGGCTCTGAT CGAGACAATG
CGCGCGCCTT ATGCGGCGGC CTATGCCCGG AAGATCGCGA CCACGAATCG TCTGCTCTAT
CGTCGCGGCA ATTTCAACGG CACCATGGAC ACGCTGATTT GCGACGCGCT GCGCGGTGCA
TTCGATGCGG AGATCGCGCT GTCGCCGGGC TTCCGCTGGG GCACCAGCGT GCTACCGGGA
CAGCCCGTAA CGATGGACGA CGTGCTCGCG GAAACCGCCT GCACCTATCC CGAGACTTAC
GTCCAGAGCA TGACCGGCGG CCAGATCAAG GATATTCTGG AAGACGTCTG CGACAACCTC
TTCAACCCGG ATCCTTACTA CCAGCAGGGC GGCGACATGG TTCGCATCGG CGGCCTGTCC
TATAGTTGCG CGCCCACGGA GAGCGTCGGC CATCGTATCT CGGACCTGAC GCTGGAGGAT
GGGCGGCCAC TCGAGGCCGG CAAGAGCTAC AAAATCGCCG GCTGGGCCTC GGTCAACGAA
CAGAAGGGCG CACCGGTCTG GGATGTCTTC GCCGAGCATC TGCGCGCCGG CGTCACAAGC
GAGGTCCGCC GCGATAGCGT GACGCTGAAA GGCGTCGACG GCAATCCGGG CTTGGCCGGA
TGA
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| Protein sequence | MIIRRRDLLK AVGAAGLSGA LPRIARAASD PAVYDLAGFG NARILHITDT HAQLLPVFFR
EPGVNLGIGT MQGQPPHLVG RAFLDRFRIR PGSADAYAFT CLGFEKSAAR FGRLGGFAHL
KTLIDRLRGE AKPNNSLLLD GGDLWQGSGL ANAMRGADMV DAANLLGIEA MTGHWEFTYG
EKTLRDNLSR FNGEFLAQNV FLTEEAAFND TPAFDAASGR VFKPATIKQL GGHRVAVIGQ
AFPYVPIAHP KRFTPDWTFG IRDEELQKLV RSLRDVDRVD AVVLLSHNGM DVDLKLASRV
SGIDVILGGH THDAVPQPIA VSNAGGTTLV TNAGSNGKFL GVLDLELAKG KVRDVRYHLL
PVFSELLKPD PAMEALIETM RAPYAAAYAR KIATTNRLLY RRGNFNGTMD TLICDALRGA
FDAEIALSPG FRWGTSVLPG QPVTMDDVLA ETACTYPETY VQSMTGGQIK DILEDVCDNL
FNPDPYYQQG GDMVRIGGLS YSCAPTESVG HRISDLTLED GRPLEAGKSY KIAGWASVNE
QKGAPVWDVF AEHLRAGVTS EVRRDSVTLK GVDGNPGLAG
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