Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3644 |
Symbol | |
ID | 4031368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 4013099 |
End bp | 4014001 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637972056 |
Product | LysR family transcriptional regulator |
Protein accession | YP_578832 |
Protein GI | 92119103 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.130745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACGG AACTGGCCAG AACCTTCCTC ACCGTCGTGA CAGCGGGGAA TTTCATCAGT GCCGCGGATC AGCTTCACGT CAGCCAGTCG ACGGTCAGCA CGCGCATTCA CACGCTCGAA GAGCAGTTGG GCTGCATGCT CTTCGTCCGC AACAAGGCTG GCACGACGCT GACGTCGGCT GGCCGGCAAT TCCAGCGGCA CGCGGCTACG CTGGTGCGGA CAATGGAACA GGCGCGGCAC GACATCGGCA TTCCGGAGGG ATTTAGCGGA ACGCTGGTTG TCGGTTGCCG CATTGGCCTG TGGGAAGAGT TCCTGCTGCA GTGGCTTCAG CTCATGAGGG AGGCCAGACC GGAAATATCC ATTCGCGCCG AAAGCGGGCA CGAGCCGGAA TTGATGCAGG GGCTAATCGA GGGGCGGATA GACATTGGCG TTATGTACAC TCCGCAGATT CGTCCGGGAT TGAAGATCGA GCAATTGTTC GAAGAGCACC TCATCCTAGT TTCAACGAAT CCGAATGGCA AACCCGAACC TCGATCCGGC TATGTGTATG TCGATTGGGG ACCTGAGTTC TACGCACGGC ACAATGCCTG CTTTCCGAAT TTTGGCAGCC CTCCGCTGAG CGCGAACATC GGCTGGGTGG GATTGCAACA CGTGCTGGAG AACGGAGGAT CCGGTTATTT CCCAAAGCGG ATCGTCACGC CCCATCTGAA GACCGGGCGT CTCAATCTGG TCAGCGACAC GCCTGAATTT TCAATGCCCG CATACGTCGT TTATCCTCTC GAGGGTGATC GCGATTTGTT TGTCAGCGCG GTCGAGATCA TGCACCAAGT CGCCAATTCG AACCCGAAGA CGGCATCGGG CGCGAAAACG ACAAAGCGGG CGGTGCGAAA AGAACAACGC TAG
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Protein sequence | MDTELARTFL TVVTAGNFIS AADQLHVSQS TVSTRIHTLE EQLGCMLFVR NKAGTTLTSA GRQFQRHAAT LVRTMEQARH DIGIPEGFSG TLVVGCRIGL WEEFLLQWLQ LMREARPEIS IRAESGHEPE LMQGLIEGRI DIGVMYTPQI RPGLKIEQLF EEHLILVSTN PNGKPEPRSG YVYVDWGPEF YARHNACFPN FGSPPLSANI GWVGLQHVLE NGGSGYFPKR IVTPHLKTGR LNLVSDTPEF SMPAYVVYPL EGDRDLFVSA VEIMHQVANS NPKTASGAKT TKRAVRKEQR
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