Gene Nham_3535 details

Gene Information

• Locus tag: Nham_3535
• ID: 4030518
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 3888057
• End bp: 3888758
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637971947
• Product: thiamine monophosphate synthase
• Protein accession: YP_578724
• Protein GI: 92118995
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0352] Thiamine monophosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCGCGA AACCCGTTTC TCCCCGCCCG GCGCCGCGTC TCTATCTCGC GACACCGAGC 
GTCGATGACC CGTCGCAACT GGCGGCCCGG CTTCCCGCGC TGCTGGCTGC CGCCGACGTC 
GCCGCCGTCA TGGTGCGGCT TTCGGCTGCC GATCCGCGCA CGCTGATTTC GCGCATCAAG 
GCGCTGGCGC CAGCGATCCA GGGTGACGGC GCCGCGCTTT TGCTCGACGG CCACGCCGAT 
CTGGTGGCGC GCTCCGGCGC CGACGGCGCG CATCTCACCG GTATCGAGGC GATGCAGGAG 
GCGATGCCAT CGTTGAAGCC CGATCGCATC GCCGGCGTCG GCGGGCTGTC CACGCGCCAC 
GATTCCATGA TCGCGGGCGA GGCCGGCGCG GATTACGTGC TGTTCGGCGA GCCGGATGAG 
GCCGGCGAAC GGCCGTCCGC CGACGCGATC GCGGAGCGGC TGGCATGGTG GGCCGAATTG 
TTCGAACCGC CCTGCGTCGG CTATGCCACG AGCATCGATG AGGCGCGGAC CTTCGCGGCA 
TCCGGCGCGG ATTTCATCCT TGCGGGCGAT TTCATCTGGA ACGATCCGCG CGGCGCGGCG 
GCGGCGGCGA TGGATACCAT TGACGCGATC AGGCAGGGTC ACGGATCGCA AGGCGACCGG 
GCGATGCCCG CAACGAAGCC GGACAGAGGT GACGCCGGAT GA 

 

Protein sequence

MLAKPVSPRP APRLYLATPS VDDPSQLAAR LPALLAAADV AAVMVRLSAA DPRTLISRIK 
ALAPAIQGDG AALLLDGHAD LVARSGADGA HLTGIEAMQE AMPSLKPDRI AGVGGLSTRH 
DSMIAGEAGA DYVLFGEPDE AGERPSADAI AERLAWWAEL FEPPCVGYAT SIDEARTFAA 
SGADFILAGD FIWNDPRGAA AAAMDTIDAI RQGHGSQGDR AMPATKPDRG DAG