| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3516 |
|---|
| Symbol | |
|---|
| ID | 4030786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 3870286 |
|---|
| End bp | 3870783 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637971928 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_578705 |
|---|
| Protein GI | 92118976 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.066418 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAACA CCGCTGACTA CGATCGCTGG AACGGCCCCA ACAACGTGCC GGGGCAGGGC
TGCGACCGGT ATCCCCGCTT CATGGGTGCG CCCTGGCATC CGCTCCGGAT CGTCCTGATC
GTACTGGGTT TCATGTTGTG GTGGCCGATC GGCCTCGCAC TTCTCTTCTT CACACTCGGG
AGCAGAAAAA TGGGTTGCTG GAGCAACGAT CGTTTCGAAA ACAAGATGCA GCGGATGCAG
TATAAGATGG AGCGGATGCG CGATCACATG GAGCGCCGGG GCTTTGGCTT CCGCGGCTTT
GGCACGCCCT CCAGCGGCAA CCGCGCTTTT GATGAGTATC GCATGGAGAC GCTGCGGCGG
CTTGAGGAAG AGCAGACCGA GTTCAAGGAC TTCCTGGATC GCCTGCGTCA CGCCAAGGAC
AAGGAAGAGT TCGACGCGTT CATGGCGCAG CACCGCCCAC GCCCGACGCC GCCGAACGAT
CAGCCGCAAG GTCAGTAA
|
|---|
| Protein sequence | MANTADYDRW NGPNNVPGQG CDRYPRFMGA PWHPLRIVLI VLGFMLWWPI GLALLFFTLG
SRKMGCWSND RFENKMQRMQ YKMERMRDHM ERRGFGFRGF GTPSSGNRAF DEYRMETLRR
LEEEQTEFKD FLDRLRHAKD KEEFDAFMAQ HRPRPTPPND QPQGQ
|
|---|
| |